Pseudomonas sp. Stari2: NH234_27465
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Entry
NH234_27465 CDS
T10554
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt00460
Cyanoamino acid metabolism
psdt00630
Glyoxylate and dicarboxylate metabolism
psdt00670
One carbon pool by folate
psdt00680
Methane metabolism
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01120
Microbial metabolism in diverse environments
psdt01200
Carbon metabolism
psdt01230
Biosynthesis of amino acids
psdt01240
Biosynthesis of cofactors
psdt04981
Folate transport and metabolism
Module
psdt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NH234_27465
09102 Energy metabolism
00680 Methane metabolism
NH234_27465
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_27465
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NH234_27465
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NH234_27465
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NH234_27465
Enzymes [BR:
psdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NH234_27465
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XCY00022
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Position
complement(5981402..5982655)
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AA seq
417 aa
AA seq
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MFSKQDRIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccggatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aaacgcgtcatggaagcgcaaggcagcggcttgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaggtcgaagcgctggccatcgaa
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcactccggttcctcg
gccaacagcgctgtctatctggcgctgatccaggccggcgacaccattctgggcatgagc
ctggcccatggcggtcacctgacccacggcgccaaggtctcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaagaccggcctgatcgattacgacgaagtcgag
cgtctggccgtagagcacaaaccgaaaatgatcgtcgccggtttctcggcctactcgaaa
accctcgatttcccacgcttccgtcagatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtcgccggtctggtggctgccggtctgtacccgaacccgttgccgtac
gccgatgtggtcaccaccacgactcacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaaggccaacgaagagatcgagaagaagctcaacgcggcggtattccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggtaaagccgtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctatcagcaacaagtgatcgacaacgctcaggcgatggcgagc
gtatttatcaaacgtggctacgatgtagtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggtaaagacgccgacgccgccctcggtcgcgcg
cacatcaccgtcaacaagaacgccgtaccgaacgacccgcagtcgccgttcgtcacctcc
ggcctgcgcatcggcaccccggcggtgacgactcgtggcttcaaggtgacccagtgcgtg
acgctggccggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aacgtcgcccagcaggttgcggccctgtgcgcagacttcccggtttatcgctga
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