Pseudomonas sp. Stari2: NH234_27535
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Entry
NH234_27535 CDS
T10554
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt01100
Metabolic pathways
Module
psdt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_27535 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_9
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
XCY00034
LinkDB
All DBs
Position
complement(6000952..6002901)
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AA seq
649 aa
AA seq
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MLNTLLPILLFAALALAVLGALRRVAMWRRGRASKVDLIGGLFAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASIVLAILVHGFGLHNRILGYALLLMTAVMFVGAIFVYRRRLNPP
SRLSKGPWMRLPKSLLAFSASFFLVTLPVAGILPENFGGWVLATILGLGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDPTAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAQFAGSPYPGKPVGEHSG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLNLLSEKKSTDVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKVDFAVLGLEERDSGDVARRLGDEATFQLLAKRNIQTLAKYSFNRIVTCDPHSFH
VLKNEYGAFDGNYLVQHHSTYLAEIIQAGALNLGQHKGNSVTYHDPCYLGRYNGEYEAPR
EVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPLIKDIAELVADALLEDAAPNKPATPAKREPAEAH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttcttccaatcctgttgttcgcagccctggccctcgcggtgctgggg
gcgttgcggcgggtggccatgtggcgtcggggccgggcctcgaaggtcgacctgatcggc
ggcctgttcgccatgcccaagcgttacatggtcgatctgcaccacgtggtggcgcgggac
aaatacatcgccaacacccacgtcgccacggcgggcggggcggtggcgtcgatcgtgctg
gcgattctggtccacggtttcggcctgcataaccgcattcttggctacgcgctgctgctg
atgacggcggtgatgttcgtcggggcgatcttcgtttatcggcgtcgcctcaacccgccg
tcgcggctgtcgaaaggcccgtggatgcgcttgccgaaaagcctgctggcgttctcggcc
tcgttcttcctggtgaccttgccggtggccgggatcctgccggagaacttcggtggctgg
gtgctcgcaacgattctcggacttggtgtgttgtggggtgtgtcggaactgttcttcggc
atgacctggggcggtccgatgaaacacgccttcgccggtgccttgcacctggcttggcac
cgccgcgccgaacgcttcggcggcggccgttccaccggtttgaagccgctggacttgaat
gatccgaccgcgccgctgggtgtggaaaagcccaaggatttcacctggaaccagctgctc
ggtttcgacgcctgcgtgcagtgcggcaagtgcgaagcggcgtgcccggcgttcgccgcc
ggccagccgctgaacccgaaaaaactgattcaggacatggtcgtcggtcttgccggcggc
accgatgcccagttcgccggcagtccttatccgggcaaaccagtgggcgaacacagcggt
aatccgcatcaaccgatcgtcaacggtctggtggatgccgaaaccttgtggtcgtgcacc
acctgccgcgcctgcgtcgaggaatgcccgatgatgatcgagcacgtcgatgccatcgtc
gacatgcgtcgtcacctgactctggaaaaaggcgcgaccccgaacaagggcgccgaagtc
ctggaaaacctgattgctaccgacaaccctggcggttttgccccgggcgggaggatgaac
tgggcggcggacctgaacctcaatctgctcagcgagaagaagtccaccgacgtgctgttc
tgggtcggcgacggcgccttcgacatgcgcaatcaacgcaccttgcgcgccttcgtcaaa
gtgctgaaagcggccaaggtcgacttcgcggtgctcgggctggaggaacgtgatagcggc
gacgtggcccgacgtcttggcgacgaagcaacgttccagttgctcgccaaacgcaatatc
cagactctggccaaatacagcttcaaccgcatcgtcacctgcgatccacacagcttccac
gtgctgaaaaacgagtacggcgcgttcgacggcaactacctcgtgcagcaccacagcact
tatctggcggaaatcatccaggccggcgcgctgaacctcggtcagcacaaaggcaacagc
gtgacctatcacgatccgtgctacctcggtcgttacaacggcgagtacgaggcgccacgc
gaagtgctgcgcgccctcggcatcgaggtgaaagagatgcaacgttccggcttccgttcg
cgttgctgcggcggcggtggcggggcgccgatcaccgacattccgggcaaacagcggatc
cccgacatgcgcatggaagacatccgcgagaccggcgccgaactggtggccgtgggttgt
ccacagtgcacggcgatgcttgaaggcgtggtcgaaccgcgtccgctgatcaaggacatc
gccgaactggtggccgatgcgctgcttgaagacgctgcgccgaacaagcctgccaccccg
gccaaacgtgaacctgcggaggcccactga
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