Pseudomonas sp. Stari2: NH234_27615
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Entry
NH234_27615 CDS
T10554
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NH234_27615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_27615
Transporters [BR:
psdt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NH234_27615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
XCY00050
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All DBs
Position
6018831..6019778
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AA seq
315 aa
AA seq
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MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLDALGYKTKT
TMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKAYRDAGTVEVVRTNLKGAKYTLAVPQ
ALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSE
AGMLSQVDRAQKRDTAVVFLGWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGY
VEECSNVGQLLKNLEFTVDMESTLMGNILDDKMKPEAAAKAWLKKNPQVLDTWLAGVTTI
DGKPGLEAVKAKLNQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttccccgtcgttgttgttggccgccatgctgagtctgccgctgctggctcaa
gccgcagaaccggcgcagtgcagtaccgttaacttctccgatgtcggctggaccgacatc
accgcgaccaccgccaccaccagcgtggtgctcgacgccctcggctacaagaccaaaacc
accatgatctccgtgcccgtgacctacaagtcgctggccgacggcaaaaacatggacgtg
ttcctcggcaactggatgccgaccatggaaaacgacatcaaggcctaccgcgacgccggc
accgtcgaagtggtgcgcaccaacctcaagggcgccaaatacaccctcgccgtgccacag
gcactgtacgacaagggtctgcatgacttcgccgacatcgccaaattcaagaaagaactc
gatggcaagatctacggcatcgaacctggcaacgacggcaaccgcctgatccagagcatg
atcgacaagaacgccttcggcttgaaagacgccggcttcaaagtcgtcgaatcttccgag
gcgggcatgctctcgcaggtcgaccgtgcgcagaaacgcgacaccgccgtggtgttcctc
ggctgggcaccgcacccgatgaacaagcgcttcaagattcaatacctgactggcggcgat
gatttcttcggcccggacttcggcgcggcgaccgtcgcgaccaacacccgcaagggctac
gtcgaggaatgcagcaacgtcggtcaactgctgaaaaacctggagttcaccgtcgacatg
gaaagcaccctgatgggcaacatcctggacgacaagatgaagcctgaagcggccgccaag
gcctggcttaaaaagaatccacaggtactcgatacctggctcgctggcgtgaccaccatt
gacggtaaaccaggcctggaggccgtgaaagccaagctgaatcagtaa
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