Pseudomonas sp. DTU12.3: C2E19_00365
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Entry
C2E19_00365 CDS
T11626
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
psdu Pseudomonas sp. DTU12.3
SSDB
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
GAF_2
GAF
HTH_50
AAA_2
AAA_16
AAA_7
GAF_3
Motif
Other DBs
NCBI-ProteinID:
QAX82383
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Position
complement(71564..73084)
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AA seq
506 aa
AA seq
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MFTQVPQPLVYAEALLAQFASLSRAADGAALLGDFVRGLAELSGCELTQLYLLDATHTCL
GMNAECLDGALQPREAASLPADYNGEQLLQFALCQNRVVCLDDLSGSLHETSFLPATTSP
WQSLLCVPLVNQHKAVEGLLLCASRRRANLQGFADSLGQLGSFVLGQLHLLQRLRQPLAQ
SAMAARSVPSISGYGLIGKSAAMRQTHSLISKVLHSPYTVLLRGETGTGKEVVARAIHDC
GPRRSRAFIVQNCAAVPENLLESELFGYRKGAFTGADRDRAGLFDAANGGTLLLDEIGDM
PLSLQAKILRVLQEGEIRPLGSNDTHKIDVRIIAATHRDLSTLVSEGKFREDLYYRLAQF
PIELPALRQREGDILELAQHFAEKTCTYLQRDPVRWSDAALEHLGGYTFPGNVRELKALV
ERAVLLCEGGELLAEHFSLRMEPAPEDNSHLNLRERLEQVERTLLLDCLRKNDGNQTLAA
RELGLPRRTLLYRLGRLNINLGDFDG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttcactcaagtgccgcagccgctggtctatgccgaagcgttgctggcgcaattcgcc
agtctgtcgcgggcggcggacggtgctgcgttgctgggtgactttgtgcgcgggctggcc
gagttgagtggttgcgagttgactcagttgtatctgctcgacgccacccacacgtgcctg
gggatgaatgccgagtgcctcgacggcgccctgcaaccgcgcgaagcggcgagcctgcca
gcggattacaacggtgaacaactgctgcaatttgccctctgccagaaccgcgtcgtgtgc
ctcgacgacttgagcggcagcctgcacgaaaccagtttcctgccagcgacgacctcgccg
tggcagtcgctgttgtgtgtgccgctggtcaatcagcacaaggctgtcgaaggcctgctg
ctgtgtgccagccggcgtcgcgccaacctgcaaggctttgccgattcgctcggtcagctc
ggctcgttcgtgcttggccagttgcatttgctgcaacgtctgcgtcagccgctggcgcaa
tcggccatggctgcgcgcagtgtgccgagcatcagtggttatggcctgatcggcaaaagc
gcggcgatgcgccagacccactcgctgatcagcaaagtgctgcacagcccgtacaccgtg
ctgctgcgtggcgaaaccggcaccggcaaggaagtcgtcgcccgcgcgattcacgattgc
ggcccgcgtcgctcccgggcattcatcgtgcagaactgcgcggcggtcccggaaaatctg
ctggaaagtgagctgttcggctatcgcaaaggcgccttcaccggtgccgaccgcgaccgc
gccgggctgttcgatgcggccaatggcggcacgctgttgctcgacgagatcggcgacatg
ccgctgtcgttgcaggcaaagattctgcgtgtgttgcaggaaggcgagattcgcccgctg
ggttccaacgatacgcacaagatcgatgtgcgcatcatcgccgcgacgcaccgcgatctg
tcgacgctggtcagcgagggcaagttccgcgaagacttgtactaccgcctcgcgcaattc
ccgatcgagctgcccgccctgcgtcagcgcgaaggcgacatccttgaactggcccagcac
tttgccgagaagacgtgtacgtatttgcagcgcgatccggtgcgctggtcggacgcagcg
ctggagcatctgggcggttacaccttccccggcaacgtccgcgaactcaaggcgttggtc
gaacgcgcggtgctgctgtgcgagggcggcgagttgctcgccgagcatttctccctgcgc
atggagccggcaccggaagacaacagccacctgaatctgcgcgaacgcctagagcaggtc
gaacgcaccttgttgctcgattgcctgcgcaaaaatgacggcaaccagaccctcgccgcc
cgcgaactgggcttgcctcggcgcacgctgctgtaccgcctcggccgtttgaatatcaac
ctgggtgacttcgatggttga
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