Pseudomonas sp. DTU12.3: C2E19_01730
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Entry
C2E19_01730 CDS
T11626
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psdu Pseudomonas sp. DTU12.3
Pathway
psdu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C2E19_01730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psdu03021
]
C2E19_01730
Transcription machinery [BR:
psdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C2E19_01730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_29
HTH_23
HTH_24
GerE
MPAB_Lcp_cat
HTH_40
HTH_11
DUF6362
FeoB_Cyto
PapC_N
Motif
Other DBs
NCBI-ProteinID:
QAX82634
LinkDB
All DBs
Position
complement(368941..369441)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSPEFAVQALYSSHHGWLNAWLRARLGNAADAADLAQDTFVRLLQRTERLELKAPRAFL
RTIARGLVIDHWRREEIERAYLEAIAHLPEAQTPSAEARALVIELLESIARMLEGLKPKV
RQAFLLAQCEGLTHKQIAEEMGLSLRSVERYVADALFHCYVLRYAS
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacctgagtttgccgtacaggcgctttacagtagtcaccatggctggctcaac
gcttggctgcgcgcacggctgggcaatgccgcagatgcggcggatctggcgcaggacact
tttgtccgcctgctgcaacgtaccgaacgcctcgaactcaaagcaccacgcgcctttctg
cgcaccattgctcgcgggctggtgatcgaccactggcgtcgtgaggagatcgaacgcgcc
tacctcgaagccatcgcccacttgcctgaagcccaaaccccgagtgccgaagcccgagcg
ctggtgatcgaactgctggaaagcatcgcgcgcatgctggaaggattgaagccgaaagtg
cgtcaggcatttctcctggcgcagtgcgaaggtttgactcacaagcagattgccgaagaa
atgggcctgtcgcttcgctcagtggaacgctacgtcgccgatgcgctgtttcattgctat
gtattgcggtacgcaagctga
DBGET
integrated database retrieval system