KEGG   Pseudomonas sp. DTU12.3: C2E19_01730
Entry
C2E19_01730       CDS       T11626                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psdu  Pseudomonas sp. DTU12.3
Pathway
psdu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psdu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C2E19_01730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psdu03021]
    C2E19_01730
Transcription machinery [BR:psdu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C2E19_01730
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF PhyR_sigma-like Sigma70_r4 HTH_29 HTH_23 HTH_24 GerE MPAB_Lcp_cat HTH_40 HTH_11 DUF6362 FeoB_Cyto PapC_N
Other DBs
NCBI-ProteinID: QAX82634
LinkDB
Position
complement(368941..369441)
AA seq 166 aa
MSSPEFAVQALYSSHHGWLNAWLRARLGNAADAADLAQDTFVRLLQRTERLELKAPRAFL
RTIARGLVIDHWRREEIERAYLEAIAHLPEAQTPSAEARALVIELLESIARMLEGLKPKV
RQAFLLAQCEGLTHKQIAEEMGLSLRSVERYVADALFHCYVLRYAS
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtcctcacctgagtttgccgtacaggcgctttacagtagtcaccatggctggctcaac
gcttggctgcgcgcacggctgggcaatgccgcagatgcggcggatctggcgcaggacact
tttgtccgcctgctgcaacgtaccgaacgcctcgaactcaaagcaccacgcgcctttctg
cgcaccattgctcgcgggctggtgatcgaccactggcgtcgtgaggagatcgaacgcgcc
tacctcgaagccatcgcccacttgcctgaagcccaaaccccgagtgccgaagcccgagcg
ctggtgatcgaactgctggaaagcatcgcgcgcatgctggaaggattgaagccgaaagtg
cgtcaggcatttctcctggcgcagtgcgaaggtttgactcacaagcagattgccgaagaa
atgggcctgtcgcttcgctcagtggaacgctacgtcgccgatgcgctgtttcattgctat
gtattgcggtacgcaagctga

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