Pseudomonas sp. DTU12.3: C2E19_08300
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Entry
C2E19_08300 CDS
T11626
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psdu Pseudomonas sp. DTU12.3
Pathway
psdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2E19_08300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdu03400
]
C2E19_08300
Enzymes [BR:
psdu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C2E19_08300
DNA repair and recombination proteins [BR:
psdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2E19_08300
Prokaryotic type
C2E19_08300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QAX87678
LinkDB
All DBs
Position
1810726..1811418
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AA seq
230 aa
AA seq
DB search
MTADDRIKLEPSWKEALRAEFDQPYMAELRQFLQQERAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMINTTMTVERANANAHKDKGWQFFTDRIIELVSERQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFGRTNKFLEQNGETPIEWRLPPI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgagctggaaggaggcactgcgtgctgag
ttcgaccagccttacatggcagagttgcgccagtttctgcagcaggagcgggcggccggc
aaggaaatctatccgccggggccgatgatttttaatgccttgaactcgacgccactggat
aaagtgaaggtggtgatcctcggccaggacccgtatcacggcccgggccaggcgcatggt
ttgtgcttctcggtgcaaccgggcgtgccggcgccgccatcgctggtcaacatctataaa
gaattgaagcgcgacctgaacatcgatatccccaatcacggctacctgcagagttgggcc
gatcagggcgtgttgatgatcaacaccaccatgaccgtcgagcgcgccaacgccaatgcg
cataaggacaaaggctggcagtttttcactgatcggatcattgaattggtcagcgaacgc
cagccgcatctggtgttcatgctctggggcgcgcatgcgcagagcaagcagaaactgatc
gacgcgaccaagcatctggtgctgacatcggtgcatccgtcgccgttgtcggcttatcgc
gggtttttgggttgcgggcactttggccgcaccaacaagtttcttgagcagaatggcgag
acgccgatcgagtggcgtttgccgccgatttga
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