Pseudomonas sp. DTU12.3: C2E19_09325
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Entry
C2E19_09325 CDS
T11626
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psdu Pseudomonas sp. DTU12.3
Pathway
psdu02020
Two-component system
psdu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C2E19_09325
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C2E19_09325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psdu02022
]
C2E19_09325
02035 Bacterial motility proteins [BR:
psdu02035
]
C2E19_09325
Two-component system [BR:
psdu02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
C2E19_09325
Bacterial motility proteins [BR:
psdu02035
]
Flagellar system
Flagellar assembly proteins
Others
C2E19_09325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA_2
AAA
AAA_3
FleQ
HTH_30
HTH_20
MerR
AAA_19
nSTAND3
AAA_22
HTH_24
Sigma70_r4_2
AAA_7
ATPase
HTH_11
HTH_28
HTH_23
AAA_14
HTH_17
DUF2249
HTH_Mga
TIP49
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
QAX84047
LinkDB
All DBs
Position
2032944..2034335
Genome browser
AA seq
463 aa
AA seq
DB search
MGIKVLLVEDDRSLREALADTLLLAGHDYQAVGSAEEALTAVAGEAFSLVVSDVNMPGMD
GHQLLALLRARQPQLPVLLMTAHGAVERAVDAMRHGAADYLVKPFEPKALLDLVARHALG
SISASDAEGPIAVEPASAQLLDLAARVARSDSTVLISGESGTGKEVLARYIHQQSHRANQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP
LRERTADILPLAERLLNKHVNKMKHAAAKLSPQAQACLIAYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLAGPVTFAPLPVATAVPPAIREVEIDADSAGALGDDLRRREFQMIIDT
LRTERGRRKEAAEKLGISPRTLRYKLAQMRDAGMDVEGYLFAT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaggttttgctggtcgaggatgaccgttcgttgcgtgaggcgctggccgat
acgctgttgctggccggccatgattatcaggcggttggcagcgcagaagaagcgttgacg
gcggtcgcgggcgaagcgttcagcctggtggtcagtgacgtcaacatgcccggcatggat
ggccatcaattgctcgccctgctgcgtgcccgtcagccgcagttgccggtgttgctgatg
accgctcacggtgccgtcgagcgcgcggtcgacgcgatgcgtcacggcgcggcggattac
ctggtgaaaccgttcgaacccaaggcgctgctggatctggtcgcgcgacatgcgctgggc
agcatcagtgccagtgacgccgaagggccgattgcggtcgagccggccagtgcgcagctg
ctcgatctcgcggcacgcgtggcgcgcagcgattccacggtattgatctcgggtgagtcc
ggcaccggcaaggaagtgctggcgcgctacatccatcagcaatcccatcgcgccaatcaa
ccgttcatcgcgatcaactgcgcggcgattcccgacaacatgctcgaagcgacgttgttt
ggtcatgagaaaggttcgttcaccggcgccatcgccgcccaggccggcaagttcgaacag
gccgacggtggcaccattctgctcgatgaaatttccgaaatgccccttggcctgcaagcc
aagctgctgcgcgtgttgcaggagcgcgaagtcgagcgcgtcggtgcgcgcaagccgatc
accctcgacatccgtgtggtcgccactaccaaccgcgatttggctggcgaagtggcggcc
gggcgcttccgtgaagatcttttttaccgtttgtcggttttccccttggcctggcgtcca
cttcgcgagcgcactgccgatatcctgccgctggccgagcggttgctgaacaaacacgtc
aataaaatgaagcatgcggcggcgaaactttcgcctcaagcgcaggcgtgtctgatcgcc
tacccgtggccaggcaatgtccgtgagttggataacgcgattcagcgcgcgttgatcctg
cagcagggtggactgatccagccgcaggatttctgtctggccggtccggtgacgttcgct
cctttaccggtggcgacagctgtaccgccagcgatccgtgaagtcgaaattgacgccgat
tctgccggtgcgctgggcgatgacctgcggcgccgggagtttcagatgatcatcgacacc
ctgcgcaccgagcgcggccgccgcaaagaagcggcggaaaaactaggcatcagcccacgc
accctgcgctacaaactggcgcaaatgcgcgatgccgggatggatgtcgaaggctatctg
ttcgccacttga
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