Pseudomonas sp. DTU12.3: C2E19_11655
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Entry
C2E19_11655 CDS
T11626
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
psdu Pseudomonas sp. DTU12.3
Brite
KEGG Orthology (KO) [BR:
psdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psdu03000
]
C2E19_11655
Transcription factors [BR:
psdu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C2E19_11655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QAX84479
LinkDB
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Position
complement(2557173..2558072)
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AA seq
299 aa
AA seq
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MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTYGIELFRRVGRQLELTE
AGRQALPYAEQMFQLGGELELMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELNEP
LRITCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGECGISFFATAELAAR
YGQDFPRSLHGAPLLIPGAETVVRSRLQRWFAEQQIQPQIVGEFDDSALMQAFGQSGSGI
FIGPSVIADEVKRQYGVELIGQTDAVTESFYAISVERKVKHPGIVAITEGARRELFTAL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattatcgacaactgcattatttctgggtggtggcgaagaccggcagcatcgtg
cgcgcctgcgagcaactgaacctgacgccacagaccatcagcgggcagatatcgctgctc
gaacaaacctacggcatagagttgtttcgacgcgtgggccgacaacttgagctcactgag
gccgggcgccaggccctgccctacgccgagcagatgtttcagctcggcggcgaactggaa
ttgatgctgcgcgcccagcccaacgaacagcagatcctcttccgtgtcggtgtggcggac
gtggtgccgaaatccatcgtctatcgcctgatcgcaccaaccatggagctgaacgagcca
ctgcgcatcacttgccgcgaagacaaacttgaacgactactcgccgatctggcgatccag
cgtctcgacctggtgatctccgacagcccaatgccctcgcacctcgacatcaaaggctac
agccagaagctcggggaatgcgggatcagtttctttgccaccgccgaactggcggcgcgt
tacggtcaggattttccacgcagcctgcacggcgcgccgctgttgattcccggcgccgaa
accgtggtgcgcagtcgtttgcagcgctggtttgccgagcagcagatccagccgcaaatc
gttggtgagttcgatgacagcgccttgatgcaggcattcggccaatccggcagcgggatt
tttatcggcccgagcgtgattgccgatgaagtgaagcgccagtacggcgtcgagctgatt
ggccagactgacgcggtgaccgagtcgttctatgccatttcggtagaacgcaaggtcaag
caccccggcatcgttgcgattaccgaaggtgcccgacgcgagctgtttaccgcgttatga
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