Pseudomonas sp. DTU12.3: C2E19_12020
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Entry
C2E19_12020 CDS
T11626
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psdu Pseudomonas sp. DTU12.3
Pathway
psdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2E19_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdu03400
]
C2E19_12020
Enzymes [BR:
psdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C2E19_12020
DNA repair and recombination proteins [BR:
psdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C2E19_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QAX84544
LinkDB
All DBs
Position
complement(2628892..2629704)
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEEVRALGYHVYFHGQK
GHYGVAMLSRQEPIAIHKGFATDEEDAQRRFIWGTFADANGLPVTIMNGYFPQGESRDHP
TKFPAKQRFYSDLQTLLESQFHNEQPVVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF
LPEEREWMARLKNWGLTDSYRHLNPEVTDMFSWFDYRSRGFEDEPKRGLRIDVILASHGL
LPRVKAAGVDYELRGMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtttccttcaacatcaacggactgcgcgcccgtccgcatcagctggcagcg
ctgatcgaaaaacatcagccggacgtcatcggcctgcaggaaaccaaggtccacgacgat
caattcccgctggaagaagtccgcgccctcggctaccacgtgtatttccatggccagaaa
ggccattacggcgtggccatgctttcgcgccaggagccgatcgccatccacaaaggtttc
gccacggatgaagaagacgctcagcgtcgtttcatctggggcaccttcgccgacgccaat
ggcctgccggtgacgatcatgaacggctatttcccacagggtgaaagccgcgaccatccg
accaagttcccggccaagcagcgtttctacagcgatctgcaaacgctgctggaaagccag
ttccacaacgaacagcccgtggtggtgatgggcgatgtgaacatttccccggaagactgc
gacatcggcatcggcccggacaacatgaagcgctggctgaaaaccggcaaatgcagcttc
ctgccggaagaacgcgagtggatggcacgcctgaagaactggggcctgactgacagttat
cgccacctgaacccggaagtgaccgacatgttcagctggttcgactaccgcagccgtggt
tttgaggatgagccgaagcgcgggctgcgcattgatgtgattctggcatcgcacggtttg
ttgccgcgggtgaaggcggcgggtgtggactatgaattgcgtgggatggaaaagccttct
gaccatgcgccgatctggcttgaactcagctga
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