Pseudomonas sp. DTU12.3: C2E19_27045
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Entry
C2E19_27045 CDS
T11626
Name
(GenBank) bifunctional diguanylate cyclase/phosphodiesterase
Organism
psdu Pseudomonas sp. DTU12.3
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
SBP_bac_3
PAS_3
PAS_8
PAS_4
Lig_chan-Glu_bd
DUF6610
Motif
Other DBs
NCBI-ProteinID:
QAX87268
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Position
5849320..5853066
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AA seq
1248 aa
AA seq
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MPRLASVLFLLSLMIWTATADALTLTDEERSWLAAHPDLHLGVDASWPPFEFRDDQNRYQ
GLAADYIDVIRQRLAIKLTPIEPVSWTEVLEQVKQGKIDLLPGIMSTPERQTYLSFTRPY
LDFPIVILAHVGGAQPRKLEDLYGLKIAVVENYAPHELLRTHHPDLNLVAMPNVSSALQA
LATDEVDAVVGDLASSVWSLRQLKLDGLYVSGETPYRYQLAMAVPRDNKMLVGILDKVLA
DMSPDEISSIQEHWVGNVLDHRTFWSDLLVYGLPGLLLLVIVLAVVIRINRRLSSEIARR
IDLEQELRSSEYHYRGLVESLSAIAWEARMSDFTYSYVSPHAEDLLGYPQSHWLIPGFWR
NIIHPADLTRAQAICDDAVREGRDHTLDYRVITADGRCLWVRDIVSLIEHGHEPVMRGLM
IDISETKRTEEALRLSEQKFASVFQQCPDILVIARLSDGCLLEVNEAFEEQIGLKAEEVI
GQTATDLNIWGIPGVGPGLLQRLQAGSIRNLEMPFRRNNGQVFTGLISAEPFDLDTTPAL
VVVVRDITQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFSRITGFNS
AMSVDRSALDLGIWVNLNERKQMLDLLHRDGFVRDFTCHIRRSDGLIRLCEVSSRPLPIG
EEDCMLTIARDITERHLMQEKLQQAATVFESTAEGVLITDTQQHISAVNRAFTEITGYSE
SEALGHTPRLLASGLHDSAFYAAMWHQLTDEGHWQGEISNRRKNGELYPSWLTISAVRNR
DKFITHFVAVFADISSLKHAQAKLDYQAHHDPLTGLPNRTLFESRLLMALNNQQENGGQG
AVLFLDLDRFKHINDSLGHPVGDLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLQQ
ASDADNIATKLLNCFGAPFQAGEHEFFISASIGTSLYPRDGCDVATLVKNADAAMYRSKA
KGRNRVESYTRDLTAQASERVALEHELRRAIERDELHLYYQPKISLDDHRLVGAEALIRW
RHPTFGEVPPEHFIPLAEENGMILQIGDWVLETACRQMFEWNQVYDSLGPLSVNLAGAQL
RQPNLLGRIEQLLNDNGLMPDLLQLEITENFIMSQAEEALAVLHQLKHLGVQLAIDDFGT
GYSSLSYLKRLPLDILKIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTVIAEGVETQAQ
QQFLAAEGCEQIQGYIVSLPLPPEEFAATFLRVTVSDYSDSTAEKPSL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgcccagactggcgtccgtgctttttttgctgtcactgatgatctggaccgcaacggct
gacgcgctgactctgaccgatgaagaacgtagctggctggcggctcacccggatttgcac
cttggtgtggacgcgtcgtggccgccgttcgagtttcgcgacgaccaaaaccgctaccaa
ggactggcagccgactatatcgacgttattcggcaacgcctcgcgatcaaactcacgccc
atcgaacccgtgagctggacagaggtgctggagcaggtcaaacaaggcaagatcgatctg
ttgccagggatcatgtcgaccccggaacgccagacctacctgtcattcacccgaccgtac
ctcgacttcccgattgtcatcctcgcccacgtcggaggcgcgcagccgcgcaaactcgaa
gacctctacggtctgaaaatcgccgtggtggaaaactacgcgccgcatgagcttttgcgc
acgcaccacccggatctgaatctggtggccatgcccaatgtcagttccgccttgcaggcc
ttggccaccgacgaggtcgacgcggtggtcggcgacctcgcttccagcgtctggagcctg
cgccagctcaaactcgacggtttgtacgtcagcggcgaaaccccctatcgctatcaactg
gcgatggccgtaccccgtgacaacaaaatgctggtgggcattctggataaagtcctggcc
gacatgagtccggacgaaatcagcagcattcaggagcactgggtcggcaacgtcctcgat
catcggacattctggtcagatctattggtttacggcctgcccggcttgctgctgctggtg
atcgtgctggccgtggtgatccgcatcaaccggcgcctgagttcggaaatcgcccggcgc
atcgacctcgaacaggaattgcgtagcagcgagtaccactatcgcgggctggtggagagc
ctgtcggccatcgcctgggaagcgcggatgagcgacttcacctacagctatgtgtcgccg
cacgccgaagatctgctcggttatccacaatcgcactggctgatcccggggttctggcga
aatatcattcatccggcagatctgacccgagctcaggccatctgtgatgacgccgtacgt
gagggtcgcgatcacacgctcgattatcgggtaatcaccgccgatgggcgctgcctgtgg
gtgcgcgacattgtcagcctgatcgaacacggtcatgagccggtgatgcgcggcttgatg
atcgacatcagtgagaccaaacgcaccgaagaggctttgcgcctgtccgagcagaaattt
gcttcggtattccagcaatgcccggacattctggtaatcgcgcggctgtccgatggctgt
ttgctggaggtcaacgaagcgtttgaggaacagatcggactgaaggccgaagaagtcatt
ggccagaccgccaccgacctgaatatctggggcattcccggggtcggtccgggactgttg
cagcgcttgcaggccggcagcattcgcaacctggaaatgccctttcgccgcaacaacggc
caagtatttaccggcctgatttccgccgagccgttcgacctcgacaccactccggcactg
gtggtcgtggtgcgcgacattactcagctcaaggaaacccagcagcaactgcaaacctcg
gaagagaagttcgccaaggcgtttcatgcctcgcccgatggcttgctgttgtcacgccag
agcgatggcctgctgctggaggtcaacgaaggcttcagccgcatcaccggtttcaacagc
gcgatgtcggtggatcgctcggcgctggatctgggcatttgggtcaatctcaacgaacgc
aaacagatgctcgatctgctgcatcgtgacggttttgtacgcgacttcacctgccatatc
cgccgcagcgatgggctgatccgcctttgcgaagtctccagccgacctctgccaatcggc
gaagaagactgcatgctgaccatcgcccgggacattaccgaacgccatctgatgcaggaa
aaattgcagcaggcggcaaccgtattcgagagcaccgccgaaggtgttttgatcaccgac
acccagcagcacatcagcgcggtcaatcgggccttcaccgagatcaccggctacagcgaa
agcgaggcgctcggccacacgccgcgcctgctcgcctccggcctgcatgacagcgcgttc
tacgcggcgatgtggcatcagttgaccgacgaggggcattggcaaggcgaaatttccaac
cgacgcaagaacggcgagttgtacccgagctggctgaccatcagcgccgtgcgtaaccgc
gacaaattcattacccactttgtcgccgtgttcgccgacatctccagcctcaagcatgcg
caggccaagctcgactatcaggcacaccacgacccactgaccggcctgccgaaccgcacg
ctgttcgaaagtcgtctgctcatggcactgaacaatcagcaggaaaacggtggtcagggc
gctgtgctgttcctcgatcttgatcgcttcaaacacatcaacgacagcctcggtcacccg
gtcggcgacctgctgctcaagggcatcgccgtgcgcctcaaagagcaactgcgcgacatc
gataccgtggcgcgactgggcggcgatgaattcatcatcctgctgcccggcctgcagcag
gccagcgacgccgacaacatcgccaccaagctgctcaactgcttcggcgcgccgttccag
gccggtgagcatgagttcttcatcagcgccagcatcggcaccagcctgtacccacgtgac
ggttgcgacgtcgcgacgctggtgaaaaacgccgacgcggcgatgtaccgctccaaagcc
aagggccgcaaccgcgtcgagagctatacccgcgacctcaccgcccaagccagtgagcgc
gtggcgctggagcacgaactgcgccgagccatcgagcgcgatgagttgcacctctactac
cagccaaaaatcagcctcgacgaccaccgtctggtcggcgctgaagcactgatccgctgg
cggcacccgaccttcggtgaagtaccgccagagcacttcatcccgctcgccgaagagaac
ggcatgattctgcagatcggcgactgggtgctggagaccgcgtgccgacagatgttcgaa
tggaaccaagtctatgacagcctcggtcctctgtcggtgaacctcgccggcgcacaattg
cgtcagccgaacctgcttggccgcatcgaacaactgctcaacgacaacggcctgatgccg
gatttactgcaactggaaattaccgagaatttcatcatgagtcaggccgaagaggcgctg
gccgtgctgcaccaactcaaacacctcggcgtgcaactggcgatcgacgacttcggcacc
ggctattcctcactcagctatctcaaacgcctgccgctggacatcctcaagatcgaccag
tctttcgtccgtggactgcccgacgacccccacgatgcggcgattgtccgcgccatcatc
gcactgggccgcagcatgcaattcaccgtcatcgccgagggtgtggaaacccaggcacag
caacaattcctcgccgccgaaggctgcgaacagatccagggctacatcgtcagcctgccg
ctgccaccggaagaattcgcggcaacgtttcttcgtgtaaccgtatcggattattcggat
agcacagccgagaaaccgtcgctataa
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