Pseudomonas sp. DY-1: D6Z43_01815
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Entry
D6Z43_01815 CDS
T11625
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psdy Pseudomonas sp. DY-1
Brite
KEGG Orthology (KO) [BR:
psdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psdy03032
]
D6Z43_01815 (gyrA)
03400 DNA repair and recombination proteins [BR:
psdy03400
]
D6Z43_01815 (gyrA)
Enzymes [BR:
psdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D6Z43_01815 (gyrA)
DNA replication proteins [BR:
psdy03032
]
Prokaryotic type
DNA Topoisomerases
D6Z43_01815 (gyrA)
DNA repair and recombination proteins [BR:
psdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D6Z43_01815 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
AYF85976
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Position
330961..333738
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AA seq
925 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMSKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLALMDNADLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARAEIEDMEKGGGRQQIIVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVGEVVLNNLYSQTQMQSVFGINVVALVDGQPRTLNLKDMLEVFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA
VEAMVERAGADSCRPEDLDPQYGLREGKYYLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILTLIGELIRILTNPERLMEVIREELEKVKAEFGDARRTEIVASQVDLTIADLITEEER
VVTISHGGYAKSQPLAAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLEENEGVV
IEGEVIEAETGDDEGADLDDEQDEPTGAYIFMATAFGTVKKTPLVQFSKPRSNGLIALKL
EEGDTLIAASITDGAKEVMLFSDGGKVIRFKEKHVRTMGRTARGVRGMRLPEGQSLISML
IPEQGAQILSASERGYGKRTPLEDYPRRGRGGQGVIAMVTNERNGKLVGAVQVQDGEEIM
LISDQGTLVRTRVDEVSSSSRNTQGVTLIKLAKDETLVGLERVQEPSGGDEDDELEEGID
ANVETVDDVQGDDVQQDEAQPAGDE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtgatcgtcgggcgcgccttgccggatgcgcgcgacggc
ctgaagccagtgcaccgtcgcgttctctacgcgatgagcgaactgggcaacgactggaac
aagccctacaagaagtccgcccgtgtggtgggtgacgtgatcggtaagtaccacccgcat
ggtgataccgcggtctacgacaccatcgtacgtatggctcagcccttctcgctgcgctac
atgctggtggacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgtatgtccaagctggcacacgagctgctggccgacctggacaag
gaaaccgtggactgggtgcccaactacgacggcaccgaacagattcccgcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggcattgccgttggcatggccacc
aacatcccgccgcacaacctgagtgaagtcattgacggctgcctggcgctgatggacaac
gccgacctcacggtcgacgagctgatgcagtacatcccgggtcctgacttcccgacagca
ggcatcatcaacggtcgcgccggcatcatcgaggcataccgtaccggccgtggccgcatc
tatatccgcgcccgcgccgaaatcgaagacatggaaaagggcggtggtcgccagcagatc
atcgtcaccgagctgccctaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtagtgatcgagctgcgccgtggcgaagtgggcgaggtggtgctgaacaac
ctctactcccagacccagatgcagagcgtcttcggtatcaacgtcgtggccctggtcgat
ggccagccgcgcacgctgaacctgaaggacatgctcgaagtgttcatccgtcaccgccga
gaagtggtgactcgccgtaccgtctacgagctgcgcaaggcccgtgaacgcgggcacatc
ctcgaaggtcaggccgtagccctgtccaacatcgacccggtgatcgaactgatcaagtct
tcgccgactccggccgaagcgaaggagcgcctgatcgccactgcctgggaatccagtgcc
gtggaggccatggtcgaacgtgcgggtgccgactcctgccgtccggaagacctggacccg
caatacggcctgcgcgaaggcaagtactacctgtcgccagagcaggcccaggccatcctg
gaactgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcaccctgatcggtgagctgatccgcatcctcaccaaccccgagcgcctgatg
gaagtcatccgcgaggagctggaaaaggtgaaggccgagttcggcgacgcccgccgcacc
gagatcgtcgcgtcccaggtggacctgaccatcgccgacctgatcaccgaggaagagcgc
gtggtcaccatctcccacggcggctacgccaagtcccagccgctggctgcctaccaggcc
cagcgccgtggcggcaagggcaagtcggccactggcgtgaaggacgaggactacatcgag
cacttgctggtcgccaacagtcacgccacgctcctgctgttctccagcaagggcaaggtc
tactggctgcgcaccttcgaaattccggaagcctcgcgtaccgcgcgtggccgtccgttg
gtcaacctgctgccgctggacgagggcgaacgcatcaccgccatgctccagatcgacctg
gaagcactgcagcagagcgcaggtgccgacgaggacctggaagaaaacgaaggcgtggtg
atcgaaggcgaagtaatcgaagccgaaaccggcgacgatgaaggcgccgacctcgacgac
gaacaggacgagcccactggcgcctacatcttcatggctaccgccttcggtaccgtgaag
aagaccccgctggtgcagttcagcaaaccgcgttcgaacggtttgatcgccctgaagctg
gaagaaggtgacaccctgatcgctgcgtccatcaccgacggcgccaaggaagtcatgctc
ttctccgacggtggcaaggtcatccgcttcaaggaaaaacacgtccgcaccatgggccga
accgcccgcggcgttcgcggcatgcgcctgccggaaggccagagcctgatttccatgctg
atcccggaacagggcgcgcagatcctttccgcctccgagcgcggttacggtaagcgcact
ccgctggaagactacccgcgtcgcggtcgcggcggccaaggcgtgatcgccatggtcacc
aacgagcgtaacggcaagctggtcggcgccgtgcaggtgcaggacggcgaggagatcatg
ctgatttccgaccagggcaccctggtacgtacccgtgtcgacgaagtctccagctccagc
cgtaatacccagggcgtgaccctgatcaagctggccaaggacgaaaccctggtcggtctg
gagcgggtccaggagccctctggtggcgacgaggacgacgagctggaagagggtatcgat
gcgaacgtggagaccgtggacgacgtccagggtgatgacgttcagcaggatgaagcccaa
ccggctggcgacgagtaa
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