Pseudomonas sp. DY-1: D6Z43_16715
Help
Entry
D6Z43_16715 CDS
T11625
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psdy Pseudomonas sp. DY-1
Pathway
psdy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psdy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D6Z43_16715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psdy03021
]
D6Z43_16715
Transcription machinery [BR:
psdy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D6Z43_16715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
GerE
Xre-like-HTH
DUF7551
Cyclin_C_2
HTH_29
HTH_24
FliT
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AYF88710
LinkDB
All DBs
Position
3532098..3532595
Genome browser
AA seq
165 aa
AA seq
DB search
MSSPHVTLQALYSEHHGWLKNWLRSKLGNAADAADLAQDTFLRLLGKGEHLELRTPRAFL
RTVARGLVIDHWRREELERAYLEALAQLPEAEAPSPEERELILELLERIARMLDRLKPKA
RTAFLLAQCEGLPHKEVAAQMGISLRSVERYVADALYHCYLLRFE
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccccatgtcaccctccaggcgctgtacagcgagcatcacggctggctaaag
aactggctgcgcagcaagctgggcaatgccgccgatgccgcggacctggcccaggacacg
ttcctgcgcctactgggtaagggcgagcacctcgaactgcgtaccccccgcgcattcctg
cgcaccgtggcgcgggggctggtgatcgaccactggcgccgcgaggagttggaacgcgcc
tacctggaagccctggcacagctgcctgaggccgaggcgccctcccccgaggagcgcgaa
ctgatcctcgaactgctggagcgcatcgcgcggatgctcgaccgtctcaagccgaaggcg
cgcaccgccttcctgctggcacagtgcgaaggcctgccccacaaggaagtcgccgcgcag
atgggcatttccctgcgctccgtggagcgctacgtggcggacgccctgtaccactgctac
ctgctgaggttcgaataa
DBGET
integrated database retrieval system
