Pseudomonas sp. DY-1: D6Z43_16790
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Entry
D6Z43_16790 CDS
T11625
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psdy Pseudomonas sp. DY-1
Pathway
psdy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psdy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D6Z43_16790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psdy03021
]
D6Z43_16790
03400 DNA repair and recombination proteins [BR:
psdy03400
]
D6Z43_16790
Enzymes [BR:
psdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D6Z43_16790
Transcription machinery [BR:
psdy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D6Z43_16790
DNA repair and recombination proteins [BR:
psdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D6Z43_16790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AYF88724
LinkDB
All DBs
Position
complement(3552823..3553824)
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLNLSKKGSGVVTAADIQLDHD
VEIVNGDHVIANLADNGVLNMKLKVSRGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQHQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccacattgatgtgcaggtggttagt
ccgacccgcgccaagatcacgctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgatggcgtactccacgagtacagcgccatcgagggtgttcaggaagatgtcatcgag
atcctcctgaacctcaaaggcctggctatcaagctgcacggccgtgacgaagtaacgctg
aacctctcgaagaaaggttcgggcgtggtcactgctgccgatattcagctggatcatgat
gtcgaaatcgtcaacggcgaccacgtgatcgccaacctggcggacaacggcgtcctgaac
atgaagctcaaggtgtctcgcggtcgtggctatgagcccgccgatgcgcgccagagcgac
gaagacgagagccgcagcattggtcgtctgcagctcgacgcctcgttcagtcccgtccgt
cgtgttgcctacgtggttgaaaacgcccgtgtggagcagcgcaccaacctggacaagctg
gtcatcgatctggaaaccaacggcaccctggaccctgaagaggccatccgtcgtgccgct
accatcctgcaacaccaactggctgcgttcgtcgacctgaagggcgacagcgagccggta
gtagttgagcaggaagacgagatcgacccgatcctccttcgtccggttgatgacctcgag
ctgaccgtacgttcggccaactgcctcaaggcggagaacatctactacatcggtgacctg
attcagcgcaccgaagtagagctgttgaagactccgaacctgggcaagaagtccctgacc
gagatcaaggacgtcctggcctcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgccggcaagtctcaagaaggacgacaaggcgactgcctga
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