Pseudomonas sp. DY-1: D6Z43_25845
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Entry
D6Z43_25845 CDS
T11625
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
psdy Pseudomonas sp. DY-1
Brite
KEGG Orthology (KO) [BR:
psdy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdy02000
]
D6Z43_25845
01504 Antimicrobial resistance genes [BR:
psdy01504
]
D6Z43_25845
Transporters [BR:
psdy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D6Z43_25845
Antimicrobial resistance genes [BR:
psdy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
D6Z43_25845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AYF90391
LinkDB
All DBs
Position
5486116..5489232
Genome browser
AA seq
1038 aa
AA seq
DB search
MNFNLSAWALQNRQIVLYIMLLLGIVGAISYTKLGQSEDPPFTFKAMVVRTNWPGASAEE
VSRQVTERIEKKLMETGEYDKIISFSRPGESQVTFIARDSMHSNEIPELWYQVRKKISDI
RHTLPPGIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQLQLQRVKDVGKVELL
GLQDEKIWIELSNVKLATLGLPLAAVQQALEEQNAVAAAGFFETPSDRVQLRVSGRFDSV
KEIRDFPIRVGDRTFRIGDVAEVRRGFNDPPAPRMRFMGEDAIGLAVSMKAGGDILVLGQ
ALETEFARLQQNLPAGMQLRKVSDQPAAVKTGVGEFVRVLTEALIIVLLVSFFSLGLRTG
LVVALSIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD
RLKAASYAWSSTAFPMLTGTLITAAGFLPIATAQSGTGEYTRSIFQVVTIALVVSWIAAV
MFVPYLGDRLLPDLAKLHAKKHGGSDKGHDPYGTPFYQRVRRVVEWCVRRRKTVILLTLA
AFVASIALFRFVPQQFFPSSGRLELMVDLKLGEGSSLANTEVEVKRLEQLLREHPGVDNY
VAYVGTGSPRFYLPLDQQLPAASFAQFVVLAKSIESREEIRSWLIQVLNDEFPTLRSRIS
RLENGPPVGYPVQFRVSGEHIDEVRALARKVADKVRENPHVVNVHLDWEEPSKVVRLNIE
QDRARAMGVSTADLSRFLQSSLTGAPVSQYREDNELIEILLRGTVRERQELALLPSLAVP
TDSGHSVPLSQIATLEYGFEEGIIWHRNRLPTVTVRADIYDKSLPAGLVKDISPTLDPIR
AELPDGYLLEVGGTVEDSARGQKSVNAGMPLFIVVVLTLLMLQLKSFSRSAMVFLTAPLG
LIGVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIALGLDRWHAIIEATV
RRFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVKP
AEAEQVRAVPVPDTQPSH
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttcaacctatccgcctgggcgctgcagaatcgccagatcgtcctctacatcatg
ctgctgctgggcatcgttggggccatttcctacaccaagctggggcagagcgaagatccg
cccttcaccttcaaggccatggtggtgcgtacgaactggccgggcgccagcgccgaggaa
gtgtcccgccaggtcaccgaacgcatcgagaagaagctgatggagaccggcgagtacgac
aagatcatctccttctcccgccctggcgagtcgcaggtgaccttcatcgctcgcgattcc
atgcattccaatgagattcccgagctctggtaccaggtccgcaagaagatcagcgacatt
cgccacactttgccgccgggaatccaggggccgttcttcaacgacgagttcggtaccacc
ttcggcaatatctatgcgctgaccggcgaaggcttcgactacgcagtgctcaaggactat
gccgaccgcatccagctgcagctgcagcgagtcaaggatgtgggcaaggtggagctgctc
ggcctgcaggacgagaagatctggatcgaactgtccaacgtgaaactggcaaccctggga
cttccgctcgctgccgtgcagcaagccctggaagagcagaacgcggtggcggcagccggc
ttcttcgaaaccccaagcgaccgtgtgcagctgagggtttccggccgcttcgattcggtg
aaggaaatccgcgatttccctatccgcgtgggcgaccgcaccttccgcatcggcgatgtc
gcagaagttcgccgtggcttcaatgacccgccggcaccgcgcatgcgcttcatgggcgag
gacgccattggtctggctgtgtccatgaaggccggaggcgacatcctggtgctcggccag
gcgctggaaaccgagttcgcccgcctgcagcagaatctgccggccggcatgcagctgcgc
aaggtgtcggaccagccggcagcggtgaagaccggagtaggggagttcgtccgcgtgctc
accgaagcgctgatcatcgtgttgctggtgagcttcttctccctgggcctgcgtacgggc
ctggtggtggcgctgtccattccgctggtgttggcaatgaccttcgccacgatgtactac
ctcggcatcggcctgcacaagatttcccttggcgccctggtgctcgcgcttggcctgttg
gtggacgacgcgatcattgcggtggagatgatggccatcaagatggagcagggctacgac
cgcctgaaggcggcgagctatgcctggagcagcaccgcattccccatgctcaccggcact
ctgatcaccgccgccggcttcctgcccatcgccaccgcgcagtcgggtacgggcgaatac
acccgctcgatcttccaggtggtgaccatcgccctggtggtgtcctggatcgccgcggtg
atgttcgtgccctacctgggcgaccgactgctgccggaccttgccaagctgcatgcgaag
aagcacggcggcagcgacaagggccacgacccatacggcacgcccttctaccagcgcgtc
cgtcgcgtggtggagtggtgcgtgcggcggcgcaagacggtgatcctgctgaccctggcg
gcgttcgtcgcttccattgccctgttccgtttcgtgccccagcagttcttcccatcctcc
ggacgcctggagctgatggtcgacctcaagctgggcgagggttcgtccctggccaatacc
gaggtcgaggtgaagcgcctggagcaactgctccgcgagcatccgggtgtggacaactat
gtggcctatgtcggcaccggttcgccacgcttctatctgccgctggatcaacaattgccg
gcggcgagcttcgcccagttcgtcgtgctggccaaatccatcgaatcgcgcgaagaaatt
cgcagttggttgatccaggtgttgaacgacgagttccccactctgcgcagccgtatctcg
cgtctggagaacggcccgccggtgggttacccggtgcagttccgcgtttccggtgagcac
atcgacgaagtccgtgccctggcccgcaaggttgccgacaaggttcgtgagaacccccat
gtcgtcaacgtgcatctggactgggaagagcccagcaaggtggtgcgcctgaatatcgaa
caggaccgcgcgcgtgccatgggtgtgagtaccgccgatctatcgcgcttcctgcagagt
tcactgaccggcgcgccggtgagccagtaccgcgaggacaacgagctgatcgagatactc
ctgcgcggcacggtgcgcgagcgccaggagctggccctgttgccgagcctggcggtgccc
accgacagcggccacagcgtgccgttgtcgcagattgccaccctggaatacggtttcgag
gaaggcatcatctggcaccgcaatcgcctgccgaccgttaccgtgcgtgccgatatctac
gacaagtcgctgccggcggggctggtcaaggatatctcgccaacgctggatccgatccgc
gcagagctgccggacggttacctgctggaagtgggcggcacggtggaagactccgctcgc
gggcagaagtcagtgaatgctggcatgccgctgttcatcgtggtcgtgctgacgctgctg
atgttgcagctgaagagcttctcgcgctcggccatggtgttcctaaccgcgcctctgggg
ctgatcggtgtgaccctgttcctgttggtgttccgccagccgttcggcttcgtcgccatg
ctcggcactatcgctctggcggggatgatcatgcgcaactcggtgatcctggttgaccag
atcgagcaggacatcgccctcggactggatcgctggcacgccatcatcgaagccacggtg
cggcgcttccggcccatcgtgctcaccgcactggcggcggtgctggcgatgatcccgttg
tcgcgcagcgtattcttcgggccgatggccgttgccatcatgggtggcctgatcgttgcc
acggccctgacgctactgttcctgcctgctctctacgcggcctggttccgggtcaaaccg
gctgaagcggaacaggtccgggcggtaccggtgccagacacccagcccagccattga
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