Pseudogulbenkiania sp. NH8B: NH8B_0208
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Entry
NH8B_0208 CDS
T01619
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pse
Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pse03019
]
NH8B_0208
03009 Ribosome biogenesis [BR:
pse03009
]
NH8B_0208
Messenger RNA biogenesis [BR:
pse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NH8B_0208
Ribosome biogenesis [BR:
pse03009
]
Prokaryotic type
rRNA processing factors
NH8B_0208
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
BAK75057
LinkDB
All DBs
Position
complement(232407..233903)
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AA seq
498 aa
AA seq
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MLHQSIPLPRDLPRPNEQILVNITPQETRVAVLEDAIVQELHVERAASRGIVGNIYLGQV
KRVLPGMQSAFIEIGLERAAFLHIADVLEQRQHPSEPQRIEKMLFEGQTVLVQVIKDPIG
TKGARLSTQISLAGRFLVHLPQEEHIGISQKIENEEDRLSLKARLEKLLPDGTPKGYIIR
TSAETASDQELAADIGYLGKLWTDIRQRSLTEPPQSLLYEDLPLAVRVLRDMVSESTEHV
IVDSTENYSRMVEFAEQYVTNAVDKIARYSGERPLFELHGIEAEIDRALARRVNLKFGGY
LIIDQTEAMTTIDVNTGGFVGNRNFDETIFKTNLEATHAIARQLRLRNLGGIIIVDFIDM
DNEEHRSQVLNELAKAMARDRTRVTLNGFTSLGLVEITRKRTRESLAHVLCEPCPTCQGR
GEIKTAQTVCYEIQREIVREARQFDAKGFRILAAQPVIDMFLDEESQSLAMLVDFIGKPI
SLSVETTYPQEQFDVVLL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcaatccattccgctgccacgcgacctgccgcgccccaacgagcagatcctg
gtcaacatcacgccgcaggaaacccgcgtcgcggtgctggaagacgccatcgtgcaggaa
ttgcacgtggagcgcgccgccagccgcggcatcgtcggcaacatttatctcggccaggtc
aagcgcgtgctgcccggcatgcagagcgccttcatcgagatcggcctggagcgcgccgcc
ttcctgcacatcgccgacgtgctggaacagcgccagcatccttccgagccgcagcgcatc
gagaagatgctgttcgagggccagaccgtgctggtccaggtgatcaaggacccgatcggc
accaagggcgcgcgcctgtcgacgcagatctcgctggccgggcgcttcctggtgcacctg
ccgcaggaagaacacatcggcatctcgcagaagatcgagaacgaggaggaccgcctgagc
ctcaaggcgcgactggagaagctgctgcccgacggcacgcccaagggctacatcatccgc
accagcgccgagaccgccagcgaccaggaactcgccgccgacatcggctacctcggcaag
ctgtggaccgacattcgccagcgctcgctcaccgaaccgccgcagagcctgctctacgaa
gacctgccgctggcggtgcgcgtgctgcgcgacatggtgagcgaatcgaccgagcacgtc
atcgtcgactccaccgagaactacagccgcatggtggagttcgccgagcagtacgtcacc
aacgcggtggacaagatcgcgcgctacagcggcgagcgcccgctgttcgagctgcacggc
atcgaggccgagatcgaccgcgccctggcgcgccgcgtcaacctgaagttcggcggctac
ctgatcatcgaccagaccgaggcgatgaccaccatcgacgtcaacaccggcggcttcgtc
ggcaaccgcaatttcgacgagaccatcttcaagaccaacctcgaggccactcacgccatc
gcgcgccaattgcgcctgcgcaacctgggcggcatcatcatcgtcgatttcatcgacatg
gataacgaggagcaccgcagccaggtgctgaacgagctggccaaggcgatggcgcgcgac
cgcacccgggtgacgctgaacggcttcaccagcctggggctggtcgagatcacccgcaag
cgcacgcgcgagagcctggcgcatgtgctgtgcgaaccgtgcccgacctgccaggggcgc
ggcgagatcaagacggcgcagacggtgtgctacgagatccagcgcgagatcgtgcgcgag
gcgcgccagttcgacgccaagggcttccgcatcctggccgcgcagccggtgatcgacatg
ttcctcgacgaggaatcgcagagcctggcgatgctggtggacttcatcggcaaaccgatc
tcgctgtcggtggaaaccacctatccgcaggagcagttcgacgtggtgctgctgtga
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