Pseudogulbenkiania sp. NH8B: NH8B_0287
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Entry
NH8B_0287 CDS
T01619
Symbol
gidB
Name
(GenBank) 16S rRNA methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pse03009
]
NH8B_0287 (gidB)
Enzymes [BR:
pse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
NH8B_0287 (gidB)
Ribosome biogenesis [BR:
pse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NH8B_0287 (gidB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Motif
Other DBs
NCBI-ProteinID:
BAK75136
LinkDB
All DBs
Position
318411..319661
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AA seq
416 aa
AA seq
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MHRIQLLAAGLLEKVEGGRTLTEALADAQRQAPDLTPAERGALQDIGYGVLRHLAEWRRV
LRQLLPKPLPEPQLERVLIVALHQLEYTRAAQYAVVNEAVTLAGRLARGRFKGLVNAVLR
NYLRQRDELKAAVAADDEARYNHPRWWIKALRRHYPQDWQAILDMDNQHPPMTLRVNRRH
VEPAAYLQRLRDAGIEAECLGEEAIQLARPVGVRELPGFADGDVSVQDQGAQQAAYRLDL
RDGLRVLDACAAPGGKTCHMLELADLDVTALDVDETRLGRVADNLARLQLSARLVAADAG
DTASWWDGVPFDRILADVPCSASGVVRRHPDIKWLRRPGDFAELARQQSALVDALWPLLA
SGGKMLYATCSIFPEENREQLAAFLARHADAVCLDDQQLLPSEQHDGFYYALLAKR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaatccagctcctggccgccggcctgctcgaaaaagtggaagggggccgtacc
ctgaccgaggccctggccgacgcccagcgccaggcgcccgatctcacgccggccgagcgc
ggcgcgctgcaggacatcggctacggcgtactgcgccacttggccgagtggcgccgtgtg
ctgcgccagctgctgcccaagcccttgcccgagccgcagctggagcgtgtgctgatcgtt
gccctgcatcagctggaatacacccgtgccgcccagtacgccgtggtcaacgaggcggtg
acgctggccggacggctggcgcgcgggcggttcaaggggctggtcaacgccgtgctgcgc
aactacctgcgccagcgcgacgaactcaaggccgccgtggcggccgacgacgaggcccgc
tacaaccacccgcgctggtggatcaaggccttacggcgccactacccgcaagactggcaa
gccattctcgacatggacaaccagcatccaccgatgaccctgcgcgtcaaccgccgccat
gtcgaaccggctgcctacctgcagcgcctgcgtgacgcgggcatcgaggccgagtgcctg
ggcgaggaggcgatccaactcgcccgcccggtcggcgtgcgtgaactgcccggctttgcc
gacggcgacgtctcggtgcaggaccagggtgcgcagcaggcggcgtaccggctcgacctg
cgcgacggcctgcgcgtgctcgacgcctgcgccgcgccgggtggcaagacctgccacatg
ctggaactggccgatctcgacgtcaccgcgctcgacgtcgacgaaacccggctggggcgg
gtcgccgacaaccttgcccgccttcagctctcggctcgcctcgtcgccgccgacgccggc
gatacggcgagctggtgggacggggtgccgttcgaccgtatcctggccgacgtgccgtgt
tccgccagcggcgtggtgcgccgtcatcccgacatcaaatggctgcgccgccctggcgat
ttcgccgagctggcgcggcagcaatccgccctggtcgatgcgctctggccgctgctcgcc
agcggcggcaaaatgctatacgctacctgctcgatttttcccgaggaaaaccgcgaacag
ctcgcggccttcctcgcgcgacatgcggatgcggtatgcctcgacgaccaacaactgctc
cccagcgagcaacatgacggcttctattacgcgctgcttgcgaagcgctag
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