Pseudogulbenkiania sp. NH8B: NH8B_0428
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Entry
NH8B_0428 CDS
T01619
Symbol
capD
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse00541
Biosynthesis of various nucleotide sugars
pse00552
Teichoic acid biosynthesis
pse01100
Metabolic pathways
pse01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NH8B_0428 (capD)
00552 Teichoic acid biosynthesis
NH8B_0428 (capD)
Enzymes [BR:
pse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
NH8B_0428 (capD)
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Paralog
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Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
CoA_binding_3
3Beta_HSD
adh_short
NAD_binding_10
DUF5646
KR
CoA_binding
C2185-like_N
Motif
Other DBs
NCBI-ProteinID:
BAK75268
LinkDB
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Position
446001..447905
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AA seq
634 aa
AA seq
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MIDKLLSFSRHHKMALLMLMDALLLPLALYSAVVLRLGGVWDPKLTPYLWIFVVPPLWVL
PIFIKLGLYRAVLKYLDDKIVYTVCYGVSLAVLVLAAVIVMARIGPFPRSSIVIFWVFAM
AYIGGSRFLLRGLVRRIDAVDSPREHVIIYGAGRAGIQLMLALQAGREYRPMAFVDDNPA
LWRHTFRGLAVHAPAELPALLTDTEAKAILLALPSVSRARQREILEKLESLHVPIKRLPG
MAELVSGEVRVEELKRVDIEDLLGRDPVPPRPELLARNIEGRVVMVTGAGGSIGSELCRQ
IVRQRPARLILFELSEFALYAIDQELKALAPQLECLPLLGSVTDYERLFRVIDGFGVQTV
FHAAAYKHVPLVEHNPLAGIRNNAFGTDVCAQAAEDGGVDTFVLISTDKAVRPTNVMGAT
KRLAELCLQTRHARGSRTRFVMVRFGNVLGSSGSVVPLFKKQIAAGGPVTVTHPEITRYF
MTIPEAAQLVIQAGAMGEGGDVFVLDMGEPVKIAELARRMVHLSGLTVKDESRPDGDIEI
RFSGLRPGEKLYEELLIGDNVLPTDHPRILRAQEYHLDEDVLTGLLQRLRDACLRHDADA
AFLLLQQAVHEFQAAERTRDWLAEQAASGVGPAR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaagctgctttccttctcgcgccaccacaagatggcgctcctgatgctgatg
gacgcgctgttgctgccgctggcgctctacagcgcggtggtgctgcgcctgggcggggtg
tgggaccccaagctcaccccctacctgtggatcttcgtggtgccgccgttgtgggtgctc
ccgatcttcatcaagctcgggctctaccgcgccgtgctgaagtacctcgacgacaagatc
gtctacaccgtgtgctacggcgtcagcctggcggtgctggtgctggcggcggtgatcgtg
atggcgcgcatcgggccgttcccgcgctcgtccatcgtcatcttctgggtgttcgccatg
gcctacatcggcggcagccgcttcctgctgcgcggcctggtgcggcgcatcgacgccgtg
gacagcccgcgcgagcacgtcatcatttacggcgccgggcgcgccggcatccagctgatg
ctggccctgcaggccgggcgcgagtaccggccgatggccttcgtcgacgacaacccggcg
ctgtggcgccacaccttccgcggcctggcggtgcacgccccggccgagctgccggcgctc
ttgaccgacaccgaggccaaggccatcctgctggccttgccgtcggtgagccgcgcgcgc
cagcgcgagattctggagaagctggagtcgctgcacgtgccgatcaagcgcctgcccggc
atggccgagctggtgtcgggcgaggtgcgggtggaggaactgaagcgggtcgacatcgag
gacctgctcgggcgcgacccggtgccgccgcgcccggaactgctggcgcgcaacatcgag
gggcgcgtggtgatggtcaccggcgccggcggctcgatcggctccgagctgtgccgccag
atcgtgcgccagcgcccggcgcgcctgatcctgttcgagctgtcggagttcgcgctgtac
gccatcgaccaggagctcaaggccctggcaccgcagctggaatgcctgccgctgctgggc
tcggtcaccgactacgagcggctgttccgcgtcatcgacggcttcggcgtgcagacggtg
ttccacgccgccgcctacaagcacgtgccgctggtcgagcacaacccgctcgccggcatc
cgcaacaacgccttcggcaccgacgtctgcgcccaggcggccgaggacggcggggtcgat
accttcgtgctgatctcgaccgacaaggcggtgcgcccgaccaacgtcatgggcgccacc
aagcgcctggccgagctgtgcctgcagacgcgccacgcgcgcggcagccgcacgcgcttc
gtcatggtgcgcttcggcaacgtgctgggcagctcgggctcggtggtgccgctgttcaag
aagcagatcgccgccggcggcccggtcaccgtcacccaccccgagatcacgcgctacttc
atgaccatccccgaggcggcgcagctggtgatccaggccggcgccatgggcgagggcggc
gacgtgttcgtgctcgacatgggcgagccggtcaagatcgccgaactggcgcggcgcatg
gtccacctctccgggctcacggtgaaggacgagagccgcccggacggcgacatcgaaatc
cgcttcagcgggctgcgccccggcgagaagctgtacgaggagctgctgatcggcgacaac
gtgctgccgaccgaccacccgcgtatcctgcgcgcgcaggagtaccacctcgacgaggac
gtgctgaccggcctgctgcagcgcctgcgcgacgcctgcctgcgccacgacgccgacgcc
gccttcctcttgctgcagcaggcggtgcacgagttccaggccgccgagcgcacgcgcgac
tggctggcggaacaggctgccagcggcgtggggccggcgcgctga
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