Pseudogulbenkiania sp. NH8B: NH8B_0742
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Entry
NH8B_0742 CDS
T01619
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03030
DNA replication
pse03430
Mismatch repair
pse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NH8B_0742 (holB)
03430 Mismatch repair
NH8B_0742 (holB)
03440 Homologous recombination
NH8B_0742 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pse03032
]
NH8B_0742 (holB)
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_0742 (holB)
Enzymes [BR:
pse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NH8B_0742 (holB)
DNA replication proteins [BR:
pse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NH8B_0742 (holB)
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NH8B_0742 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
BAK75574
LinkDB
All DBs
Position
755422..756429
Genome browser
AA seq
335 aa
AA seq
DB search
MLYPWQAADWQRLNRERERLPNAWLFNGPSGIGKLAFAEHLAASLLCESPRPDHAACGQC
EACRWFAHGSHPDFRRLTPLGDDEDEAKEGSKPTRKLPVIKIEAVREVIDFAHLTAHRAG
QRIVLVEPAEALNPAAANALLKILEEPPAEVLFLLVAHAPQRLLPTIKSRCRAFPLTAPT
QGEALAWLDAAGVDNARTELAHHGGTPLFEHDAALAKLRQQFLDGLARPTLADAIALAEQ
IDRHKLPLALPLEWLQKWLHDLAGLRLAGQLRYYPDHQAALQALAERADLALLMGCYQSL
IQLAPFGQHTLNVRLQLEALLMDYLNVFAARTAAR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgctctatccctggcaagccgccgactggcagcgtctcaaccgcgaacgcgagcgcctg
cccaacgcctggctgttcaacggtcccagcggcatcggcaagctggccttcgccgagcac
ttggcagcctcgctgctgtgcgaatcgccgcgccccgaccacgctgcctgcggccagtgc
gaggcctgccgctggttcgcccacggcagccacccggacttccgccgtctcacgccgctg
ggcgacgacgaggacgaggcgaaggagggcagcaagccgacacgcaagctgccggtgatc
aagatcgaggcggtgcgcgaggtgatcgacttcgcccaccttaccgcgcaccgtgccgga
cagcgcatcgtgctggtggagccggccgaggcgctcaacccggcggcggccaacgcgctc
ctgaagatcctcgaggagccgcccgccgaggtgctgttcctgttggtggcgcacgccccg
cagcggctgctgccgaccatcaagagccgctgccgcgcttttccgctgacggcgccgacg
caaggggaggcactggcctggctggacgccgccggggtggacaacgcccgcaccgagctg
gcgcaccacggcggcacgccgctgttcgagcacgacgcggcgctggccaagctgcgccag
cagttcctcgacggcctggcgcggccgacgctggccgacgccatcgcgctcgccgagcag
atcgaccgccacaagctgccgctggcgctgccgctggagtggctgcagaagtggctgcat
gatctggccggtttgaggctggcgggccaactccgctattatcccgatcatcaggcggca
ctgcaggccctggccgagcgtgccgatctcgccttgctgatgggctgctaccagagcctt
attcagctggccccgttcggtcagcacacgctgaacgtacgcttgcagctcgaagcgctg
ttgatggactatctgaacgtgttcgcggcccgcacggccgcgcgctga
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