Pseudogulbenkiania sp. NH8B: NH8B_1076
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Entry
NH8B_1076 CDS
T01619
Name
(GenBank) lytic transglycosylase, catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pse01011
]
NH8B_1076
Enzymes [BR:
pse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NH8B_1076
Peptidoglycan biosynthesis and degradation proteins [BR:
pse01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NH8B_1076
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
NMB0315_dom_I
SLT_2
Xre-MbcA-ParS_M
DUF4158
Motif
Other DBs
NCBI-ProteinID:
BAK75906
UniProt:
G2IZV8
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All DBs
Position
complement(1094864..1096771)
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AA seq
635 aa
AA seq
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MALSLSFVFSAAPLVHAEDSGAFRQSIGVDEGLATGLDMMLLNSSLLRNGDNVWQRVREG
FQLDEVNAELVRRHERSLAARPEYFSRILERSHKYLFHIMNEVERRGMPTEIALLPAVES
AFVATAQSPVGASGLWQFMPSTGRHYGLEQTWWYDGRRDVTASTSAALDYLDYLHGLFGD
WNLALAAYNWGEGNLTRAIARAQAAGLEPTYENLKLPNETRNYVPKLLAVRNLLASPDKF
GLKLDKFPNKPYFVAVSTGRHMDLDVAAKMAGMSVSEFKELNPAFNLPVYAHKAGRQMLI
PANRVDKFEANLNKWDKPLLSWQVYTPATDEDLAAVADRYGMSPAQLQAVNRVKGSTISA
GKPLLVALKGNADLNSTTTDTDSGGDTTVAGTLSTATLVASASPAVMVSNTPNGGIQPVA
LTVRATTAATPVAPPPAATLQDSTGAARSAASTPPPQSSSPVSKPSEASVAANAATPGST
PQVKASEASVASSKANEAGTAVANNATPAVATTYIVASGDTLYNIARRYNLTVSDLKAFN
GLADNDIRLGQTLQLKAPAGTGYLAAASRDSLMRVAATATAATGAVPAEYVVQRGDTMFS
IARKFGVRHSDLQRWNGSDEVVSLQPGQRVRLQGL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
ttggcactttcgttgtcatttgtattttccgccgccccgctggtccacgcggaagactcg
ggcgccttccgccagtcgatcggggtggacgaaggcctggccaccggcctcgacatgatg
ctgctcaactccagtctgctgcgtaacggcgacaacgtctggcagcgcgtgcgcgagggc
tttcagcttgacgaggtcaacgccgaactggtgcgccgccacgaacgcagcctggccgcc
cgtcccgaatacttcagccgcattctcgaacgtagtcacaaatacctattccacatcatg
aacgaagtggaacggcgcggcatgccgaccgagatcgctctgctgccggcggtcgagagc
gccttcgtcgccaccgcccagtcgccggtgggcgcctccggcttgtggcagttcatgccc
tccaccgggcgccactatggtctggaacagacctggtggtacgatggccgccgcgatgtc
accgcctccacctccgccgcgctggactacctcgattacctgcacggcctgttcggcgac
tggaacctggcgctcgccgcgtacaactggggagaaggcaacctgacacgcgccatcgcc
cgcgcccaggccgccggccttgaacccacctacgaaaacctcaagctgccgaacgagacg
cgcaactacgtacccaagctgctggcggtgcgcaacctgctcgccagccctgacaaattc
ggcctgaagctcgataaattccccaacaagccctatttcgtcgcggtttccaccggtcgc
cacatggacctggacgtcgccgccaaaatggccggcatgtcggtgagcgagttcaaggaa
ctcaatccggccttcaacctgccggtctacgcccacaaggccgggcgccagatgctgatc
ccggccaaccgcgtcgacaaattcgaagccaacctcaacaagtgggacaagccgctgctg
agctggcaggtttacaccccggccaccgatgaagacttggccgccgtggccgaccgctac
ggcatgagcccggcccagctgcaggctgtgaaccgcgtcaagggctccaccatcagcgcc
ggcaagcccttgctggtagcgctgaaaggtaacgccgacctcaacagcaccaccaccgac
accgatagcggcggcgacactaccgtggccggcacgctttcgacagcaacgctggtcgcc
agcgccagcccggcagtcatggtaagcaacaccccgaatggcggcatccagccagtggcc
ctgaccgtgcgcgccacgactgccgctacccctgtggcaccgccaccggcggccaccctg
caggacagcaccggcgcagcgcgtagcgccgccagtacgccgcccccccagagcagcagc
cctgtgagtaagccgagcgaggccagcgtcgccgccaacgccgcgacaccgggcagcaca
ccgcaggtcaaagccagcgaggcgagtgtcgccagcagcaaggctaatgaagccggcacg
gccgtcgcgaacaacgcgaccccggccgttgccaccacctacatcgtggcctcgggtgac
acgctctacaatattgcgcgccgctacaatctgacggtcagcgatctgaaagccttcaac
ggcctggccgacaacgacatccgcctggggcagaccttgcagctcaaagccccggccggc
acgggctacttggccgccgcttcgcgcgacagcctgatgcgggtcgcggccaccgccacg
gcagcaaccggcgcggtgcccgccgaatacgtggtgcagcgcggcgataccatgttcagc
atcgcccgcaagttcggcgtgcgtcacagcgacctgcaacgctggaatggctcggacgaa
gtggtctcgctgcaaccgggccagcgcgtccgcctgcagggtctgtaa
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