KEGG   Pseudogulbenkiania sp. NH8B: NH8B_1875
Entry
NH8B_1875         CDS       T01619                                 
Name
(GenBank) YkuD family protein
  KO
K16291  L,D-transpeptidase ErfK/SrfK
Organism
pse  Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:pse00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pse01002]
    NH8B_1875
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pse01011]
    NH8B_1875
Peptidases and inhibitors [BR:pse01002]
 Cysteine peptidases
  Family C82
   NH8B_1875
Peptidoglycan biosynthesis and degradation proteins [BR:pse01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   NH8B_1875
SSDB
Motif
Pfam: YkuD LysM
Other DBs
NCBI-ProteinID: BAK76690
LinkDB
Position
complement(1960254..1961246)
AA seq 330 aa
MAPAAAATFTLPTDGSTVVGQVLVVEPTGNNTLPDIARHYDIGYEEIARANPEQSVWTPH
GAVVVPRQFILPPKPWQGVVLNIPQRRLYYFPTTAKGQPPQQVITYPISIAREGWSTPLG
ATRIKAKFKDPAWFVPKSIRDEHLREDGVELPEYFPPGPDNPMGMLAMQTGFPGIFIHAT
NRPWGVGLRTSHGCLHLYPEDAAQIFPQMKVGTPVRVIDEPVLVGNDGGRWVMATFEPVD
EYPDKVPLEQRVAQALSTVPLPPDEIDQERVTQLATTPQPVPVALSASEPGLDDWLSELP
VEPYNFEPYGIDANNALLPRLPASEEIELP
NT seq 993 nt   +upstreamnt  +downstreamnt
ttggcccccgcggcggccgctacctttacgctgccgaccgacggctcgaccgtagtgggc
caggtactggtggtcgaaccgaccggcaacaacacgctgcccgacattgcccgccattac
gacatcggctacgaggagatcgctcgcgccaaccccgagcagtcggtctggacgccgcac
ggcgccgtggtggtgccgcgccagttcattctgccgcccaagccgtggcagggcgtggtg
ctgaacatcccgcagcggcggctgtactactttccgacaaccgccaagggacagccaccg
caacaggtcatcacctatcccatcagtatagcgcgcgagggctggtcgaccccgctcggg
gccacccgcatcaaggccaaattcaaggacccggcctggttcgttcccaagagcatccgc
gacgagcatttgcgcgaggacggcgtcgagctgccggagtacttccccccgggccccgac
aacccgatgggcatgctggcgatgcagaccggcttccccggcatcttcatccacgccacc
aaccggccgtggggggtgggtctgcgcaccagtcacggttgcctgcatctgtatcccgag
gatgccgcgcagattttcccgcagatgaaggtgggaacgccggtcagggtgatcgacgag
cccgtgctggtcggcaacgatggcggccgctgggtgatggccaccttcgaaccggtggac
gaatacccggacaaggtaccgctggagcagcgggtcgcgcaggcgctctcgaccgtgccc
ctgccgcccgatgaaatcgaccaggagcgggtaacgcaactggccaccaccccgcaaccg
gtgccggtcgcgctgtcggcctccgagccgggcctggacgactggctcagcgagttgccc
gtcgagccgtacaacttcgagccctacggcatcgatgccaacaatgccctgctgcctcgc
ctccccgccagcgaggaaatcgaattgccgtaa

DBGET integrated database retrieval system