Pseudogulbenkiania sp. NH8B: NH8B_1875
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Entry
NH8B_1875 CDS
T01619
Name
(GenBank) YkuD family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pse
Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pse01002
]
NH8B_1875
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pse01011
]
NH8B_1875
Peptidases and inhibitors [BR:
pse01002
]
Cysteine peptidases
Family C82
NH8B_1875
Peptidoglycan biosynthesis and degradation proteins [BR:
pse01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NH8B_1875
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Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
BAK76690
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All DBs
Position
complement(1960254..1961246)
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AA seq
330 aa
AA seq
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MAPAAAATFTLPTDGSTVVGQVLVVEPTGNNTLPDIARHYDIGYEEIARANPEQSVWTPH
GAVVVPRQFILPPKPWQGVVLNIPQRRLYYFPTTAKGQPPQQVITYPISIAREGWSTPLG
ATRIKAKFKDPAWFVPKSIRDEHLREDGVELPEYFPPGPDNPMGMLAMQTGFPGIFIHAT
NRPWGVGLRTSHGCLHLYPEDAAQIFPQMKVGTPVRVIDEPVLVGNDGGRWVMATFEPVD
EYPDKVPLEQRVAQALSTVPLPPDEIDQERVTQLATTPQPVPVALSASEPGLDDWLSELP
VEPYNFEPYGIDANNALLPRLPASEEIELP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttggcccccgcggcggccgctacctttacgctgccgaccgacggctcgaccgtagtgggc
caggtactggtggtcgaaccgaccggcaacaacacgctgcccgacattgcccgccattac
gacatcggctacgaggagatcgctcgcgccaaccccgagcagtcggtctggacgccgcac
ggcgccgtggtggtgccgcgccagttcattctgccgcccaagccgtggcagggcgtggtg
ctgaacatcccgcagcggcggctgtactactttccgacaaccgccaagggacagccaccg
caacaggtcatcacctatcccatcagtatagcgcgcgagggctggtcgaccccgctcggg
gccacccgcatcaaggccaaattcaaggacccggcctggttcgttcccaagagcatccgc
gacgagcatttgcgcgaggacggcgtcgagctgccggagtacttccccccgggccccgac
aacccgatgggcatgctggcgatgcagaccggcttccccggcatcttcatccacgccacc
aaccggccgtggggggtgggtctgcgcaccagtcacggttgcctgcatctgtatcccgag
gatgccgcgcagattttcccgcagatgaaggtgggaacgccggtcagggtgatcgacgag
cccgtgctggtcggcaacgatggcggccgctgggtgatggccaccttcgaaccggtggac
gaatacccggacaaggtaccgctggagcagcgggtcgcgcaggcgctctcgaccgtgccc
ctgccgcccgatgaaatcgaccaggagcgggtaacgcaactggccaccaccccgcaaccg
gtgccggtcgcgctgtcggcctccgagccgggcctggacgactggctcagcgagttgccc
gtcgagccgtacaacttcgagccctacggcatcgatgccaacaatgccctgctgcctcgc
ctccccgccagcgaggaaatcgaattgccgtaa
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