Pseudogulbenkiania sp. NH8B: NH8B_1889
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Entry
NH8B_1889 CDS
T01619
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pse
Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_1889
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NH8B_1889
Archaeal homologous recombinant proteins
NH8B_1889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
BAK76704
UniProt:
G2J3Q9
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All DBs
Position
1975143..1976363
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AA seq
406 aa
AA seq
DB search
MRILHTSDWHLGQHFMGKTRQAEHQAFIDWLIRHVRDHAVDAVIIAGDIFDTGAPPSYAR
ELYNRLVVELHNAGTSLVLLGGNHDSVATLGESRPLLSYLSTTVIPAVEESLDQQVLVLN
KRDGTPGAIVCAIPFIRPRDVMQSQAGQSAEEKQLSLQEAIHHHYQAVYQLACAKRDAQR
RPLPIIATGHLTTVGASASESVREIYVGALEAFPTTAFPPADYIALGHIHRPQKVGGLEH
VRYSGSPIPLSFDEASQQKEVLLVDVDDIGLMGITPLPVPRFQQLVSLKGDLKTLESQIQ
DAAQLGSAEQPVWLEVLVKGDDYLSDLQTRIQSMTEGLPVEILRLRRDRGNAVAALQAAA
KETLDELTPFDVFGKRLEQETLDEELRAQLEARYRRVVTSLQEGAA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccatacctctgactggcatctgggccagcacttcatgggcaagacccgt
caggcagagcaccaagcctttatcgactggctgatccggcacgttcgcgaccacgccgtc
gacgccgtcatcatcgccggggacatcttcgataccggcgctcctcccagctacgcgcgc
gagctgtacaaccggctggtggtcgagctgcacaacgccggcacctcgctggtgttgctg
ggcggcaaccacgattcggtggccacgctgggagaaagccggcccttgctgtcctacctc
agcaccaccgtcatccccgccgtcgaagagagtctggaccagcaggttctggtgctgaat
aaacgtgacggcacgcccggcgccatcgtctgcgccattccgttcatccgtccgcgcgac
gtgatgcagagccaggccgggcagagcgcggaggagaaacagctctcgctgcaggaagcc
atccatcatcactaccaggccgtgtatcagctcgcctgtgccaaacgcgacgcgcagcgc
cggcccttgccgattatcgccaccggccatctcaccaccgtcggcgccagcgccagcgaa
tcggtgcgggagatctacgtcggcgcgctggaagccttcccgaccaccgctttccccccg
gccgattacatcgcgttgggtcatatccatcgcccacagaaggtgggcgggctggaacac
gtccgctacagcggctcgcccatccccttgagctttgacgaagccagccagcaaaaggaa
gtgctgctggtggacgtggacgatatcggcctgatgggcatcacgccgctgcccgtgcca
cgcttccagcaactggtttcgctcaagggtgatttgaagacactggaaagccagattcag
gacgcagcccaactgggcagtgccgagcagccggtgtggctggaagtgctggtgaagggg
gacgattacctgtcggatctgcaaacccgcatccagagcatgaccgaaggcctgccggtg
gaaatcctgcgcctgcgccgggatcggggcaatgccgtcgccgccctgcaagccgcggcc
aaagaaacgctggacgaactgacgccgttcgacgtgttcggcaaacggctggagcaggaa
acgctggacgaggagctacgggcacagctggaagcacgctaccgccgtgttgtgaccagc
ctgcaggagggcgcggcatga
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