Pseudogulbenkiania sp. NH8B: NH8B_1890
Help
Entry
NH8B_1890 CDS
T01619
Name
(GenBank) nuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pse
Pseudogulbenkiania sp. NH8B
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_1890
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NH8B_1890
Archaeal homologous recombinant proteins
NH8B_1890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
RsgA_GTPase
nSTAND3
cobW
Gmx_para_CXXCG
AAA_15
AAA_22
NTPase_1
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAK76705
UniProt:
G2J3R0
LinkDB
All DBs
Position
1976360..1979782
Genome browser
AA seq
1140 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWKIDFTQPPFKDNGLFAITGPTGAGKSTLLDAICLALYHETPR
LKTISASSNEIMTRHTADCLAEVEFEVKGQVYRAFWSQRRARDKADGALQAPKVELADGA
GNILTSQINDKLKRIEAITGLDFARFTKSMMLAQGGFAAFLNASANERAELLEELTGTDI
YGQISQRVFEQARDAKQALDQLKAKADGVELLPEERRQAMQEQIGELTQQLAALHAEQEQ
TRALRQWRHEVGQAELAEEQAQSAEQAAQDALRQAEPELQRLQRSEPAEAIRPVYLAWQD
AMARQGQTRSALERVQEQLAASRQDAVSAHWQATTLAEGLAAREQQRGQAVQDELQASQA
WLAQHAHFAGLGEKLSGWQSEYGQIQQAQQAVQQLQTQQQAQQGELADIETRLARQVQAL
QQATARHEQSRQATQEAERQAAALLQGQTLAGLRDSWQRMQEQLQAWRQLAQQATQLRQL
SAQRVQQEASLADTHQQLAEQQTGLDALRRDYRQLKEQVDDKRKLLLQEQRIQSLEAHRA
ALLPGEACPLCGSHEHPGIQSYPQLDSSATERALQEKEAALQRLEETGNAAKSQLANLTG
RQEQQQQSLAALAQSLQHAQAEWNAKAAQLGLSDNEWQHESSLQHGLATAEQQEAALKTT
LQQAETAQQRLPEAQQQEAQSAAQRQDAGQQHELLQQSQAHAAKRLAELQQQRDVASRAA
QQASERLLAAIAAAGFTPDSDMADWLAGRQQDWQAWQAKQREQQQQEAELLKQQARSEHA
ASQAQVWQARWCKLGVAAPGHSADPLLDEAALAHCAERVEALSAQIASLQGQHAQLEADL
HAQQRQGVDAETAWLSALAASPFADGDAFRQALLPAEERQRLQTLRQQLQQAVEHYQAVL
HAAAATLLALQQQARTPLVLAELDAALATLDAQRQALSSQQGALQALLNDDAQRREGQQA
LFQQIEHQAADVDIWQRLNSLIGSKEGDKFRKFAQGLTLDHLMHLANRHLERLHGRYLLQ
RKPTGELELEIVDTWQADVTRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDGETLEVALDALDAINSSGKSIGVISHVAGMQERIAVQIVIRKASGLGASRIEIAA
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctgaccctgcgcctgaaaaacctcaactcgctcaagggcgagtggaaaatc
gactttacccagccgccgttcaaggacaacggcctgttcgccatcaccggccccaccggc
gccggcaagtccacgctgctcgatgccatctgtctggcgctgtaccacgaaaccccgcgc
ctcaagaccatctccgcctcgtccaacgagatcatgacgcgccacaccgcggattgcctg
gccgaggtggagttcgaggtgaaggggcaggtgtaccgcgcgttctggagccagcgccgc
gcacgcgacaaggccgatggcgctttgcaggcccccaaggtggaactggccgatggcgcc
ggcaacatcctgacctcccagatcaacgacaagctcaagcgcatcgaggcgattaccggg
ctggacttcgcccgtttcaccaagtcgatgatgctggcgcaaggcggttttgccgccttc
ctcaacgccagcgccaacgagcgtgccgaactgctggaagagctgaccggcaccgacatc
tacggccagatttcgcagcgcgtgttcgagcaggcacgcgatgccaagcaggcgctggat
cagctcaaggccaaggccgacggggtcgaactgctgcccgaagagcgccgacaggcgatg
caagagcaaatcggcgaactcacgcagcagttggcggcgctgcacgccgaacaggagcaa
acccgggccctgcgccagtggcgccatgaggtgggccaggccgagttggccgaagagcaa
gcgcagtccgccgaacaagccgcccaggacgcactgcgtcaggccgagccggaactgcaa
cggctgcaacggagcgagccggccgaggcgatccgccccgtctacctggcgtggcaggac
gcgatggcccggcaaggccagacccgaagcgccctggagcgggtgcaagagcagctcgcc
gccagccggcaggacgcagtgtcggcccactggcaggccacaaccctggccgaaggcttg
gcggcacgcgagcagcagcgcggccaggccgtgcaggacgaactccaggccagccaggcg
tggttggctcagcacgcccactttgccgggttgggcgagaaactgagcggctggcagagc
gagtacggccagattcagcaagcgcaacaggcggtgcagcagctgcaaacccagcagcag
gcgcagcagggtgaactggccgacatcgaaacccgcctggcccgacaagtacaggccttg
cagcaagccaccgcccgccacgaacaaagccggcaagcgacgcaagaagccgagcgccag
gcggccgcgctgctgcaaggccagacgctggcgggcctgcgcgacagctggcagcgcatg
caggaacagctgcaggcatggcggcagctggcccagcaggcaacgcagctgcgccagctc
tccgcccagcgcgtgcaacaggaagccagccttgccgatacccaccaacagttggccgaa
cagcaaaccgggctggacgccctgcgtcgcgactaccgccagctgaaagagcaggtggac
gacaagcgcaagctgctgctgcaagagcagcgcattcagagcctggaagcgcaccgtgcc
gcgttgctgccgggcgaggcctgccccttgtgcggctcgcacgagcaccccggcatccag
tcctatccgcaactggacagctctgcgaccgaacgcgccctgcaggaaaaggaagccgcg
ctgcagcggctcgaagaaaccggcaacgccgccaagagccagctggccaacttgaccggc
cggcaggaacagcagcaacagtccctcgcggcgctggcgcagtcgctccagcacgcccag
gccgagtggaacgccaaggccgctcagctcggcctgagcgataacgagtggcagcacgaa
tcctccctgcagcacgggttggccacggcggagcagcaggaagccgccctcaagaccacg
ctgcagcaggccgaaacagcacagcaaaggttgcccgaagcccagcagcaagaggcgcag
tccgccgcgcaacggcaggacgccggccagcagcacgaattgctgcagcaaagccaagcc
catgcggccaagcgcctggccgagctgcaacaacagcgggacgtcgcctcacgcgccgca
cagcaagccagcgagcgcctgctggccgccatcgccgccgccggattcacgccagacagc
gacatggccgactggctggccgggcgccagcaagactggcaggcgtggcaggccaaacag
cgagagcagcaacagcaagaggccgaactgctcaagcagcaagcccgcagcgaacacgcc
gccagccaggctcaggtctggcaagcgcgctggtgcaagctgggtgtcgccgcgcccggc
cacagtgccgatccgctgctggacgaggcggcactcgcccactgcgccgagcgggtagag
gcgctgtccgcgcagatcgccagcctgcaaggccagcacgcccaactggaggcagacctg
cacgcgcagcaacggcagggcgttgacgccgaaaccgcctggctgtcggcgctggcggcc
agcccgtttgccgatggcgacgccttccggcaagccctgctgccggcggaagaacgccag
cggctgcaaaccctgcgccagcaacttcaacaagcggtggaacattaccaagccgtgctc
cacgctgctgccgcgaccttgctcgccctgcaacagcaggcccgcaccccgctcgtcctg
gcggaactggacgccgccctcgccacgctcgacgcgcaacgacaggccctctccagccag
caaggcgccctgcaggcgctgctcaacgacgacgcccagcgccgggaaggccagcaggcg
ctgttccagcagatcgagcaccaggcggccgacgtggacatctggcagcggctcaacagc
ctcatcggctcgaaagagggcgacaaattccgcaagtttgcccaagggctgacgctggac
cacctgatgcacctggccaaccgtcatctcgaacggctgcacggccgctatctgctgcag
cgcaagccgactggcgaactggagctggaaatcgtcgacacctggcaggccgacgtcacg
cgcgacacccgaacgctgtcgggcggcgagagtttcctggtcagcctggcgctcgccttg
gcgctgtccgacctggtcagccacaagacctcgatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacggtgaaacgctggaagtggcgctggatgcactggatgccatcaac
tccagcggcaagtccatcggggtgatcagccacgtggccggcatgcaggagcgcatcgcg
gtgcagatcgtcatccgcaaggcgagcgggctgggggcttcccgcatcgagatcgccgcc
tga
DBGET
integrated database retrieval system
