Pseudogulbenkiania sp. NH8B: NH8B_2445
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Entry
NH8B_2445 CDS
T01619
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NH8B_2445 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pse03019
]
NH8B_2445 (rhlE)
Enzymes [BR:
pse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NH8B_2445 (rhlE)
Messenger RNA biogenesis [BR:
pse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NH8B_2445 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
P-loop_SecA
Helicase_C_2
zf-ZTF-17_C2H2_2
MSSS
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAK77259
LinkDB
All DBs
Position
2566586..2567839
Genome browser
AA seq
417 aa
AA seq
DB search
MGLQPSLAQAALSQGYLAPSAIQTSAIPAILQGRDVLATAQTGSGKTAAFCLPLLQQWLT
SRQGSPRQVQALILLPTRELAVQVGNTLRELALSLPRRVKVAVVYGGVSINPQMMALRGG
ADIVVATPGRLLDLIAHNALSISTVGTLVLDEADRLLDLGFADELDRLLALLPPYRQNLL
FSATFPPAVHTLAEQLLSQPLRIDIAQTAATAPDIHQRAIEVDASQRTMLLRHLLQTHGW
DRVLVFVASRQAADRVTGKLQRAGIRAAALHGDCSQGQRGQVLADLKSGQLQVLVATDVA
ARGIDIPLLPVVVNYDLPRSPVDYTHRIGRTGRAGASGEAISFISADCAAHFQLIEKRQQ
RRLQREQIAGFEPIVTSNVASLGHTAEHVGNGGIKGKRKSKKDKLREAAAQQQADNS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgcaaccctctctggcccaggccgccctcagtcagggctaccttgccccctct
gccatccagacctccgccattcctgccattttgcagggccgtgatgtactggccaccgca
cagaccggctccggcaagacagcggccttctgtctgccgctgctgcagcaatggctgaca
agtcgccagggttcgccacgtcaggttcaggcgttgatcctgctacccactcgcgaactg
gcagttcaggtcggcaataccctgcgtgaactggccctgtccctgccacggcgcgtgaag
gtggccgtggtctatggcggtgtctccatcaacccgcaaatgatggccttgcgcggcggt
gccgacatcgtggtggcgacccccggacgcctgctggacttgatcgcgcataatgcactg
agtatttccaccgtcggcaccctggtactggacgaggccgaccgtctgctcgacctcggt
tttgccgacgaacttgaccgcctgctggccttgctgcccccctaccggcagaacctgctg
ttctccgccacgtttccgcccgctgttcacacactagcggaacaactactgagccagcca
ctgcgcatcgacattgcgcagaccgccgccacggcaccggatatccaccagcgcgccatc
gaagtggacgccagccagcgcacgatgctgctgcgccacctgttgcagacgcatggatgg
gaccgggtactggtgttcgtggctagccggcaggctgccgaccgtgtgaccggcaagctg
caacgtgccggtatccgtgccgcggccctgcatggcgattgcagccagggacagcgcggc
caagtgctggccgatctcaagtcgggacagttgcaggtactggtggccaccgacgtggcg
gctcgcggcatcgacatccccctcctgccggtggtggtcaactacgatctgccacgctcg
ccggtggactacacccaccgtatcggccgtaccggccgggccggtgctagcggcgaagcc
atcagtttcatcagcgccgactgcgccgcccatttccagctgatcgagaagcgccagcag
cgacggctgcagcgcgaacagattgccggtttcgagccgatcgtcacctcgaatgtcgcg
agcttaggccacactgccgaacacgtcggcaacggcggcatcaagggcaaacgcaaaagc
aagaaagacaagctgcgcgaagccgccgctcaacaacaggcggacaacagctag
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