Pseudogulbenkiania sp. NH8B: NH8B_2479
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Entry
NH8B_2479 CDS
T01619
Symbol
glyA
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse00260
Glycine, serine and threonine metabolism
pse00460
Cyanoamino acid metabolism
pse00630
Glyoxylate and dicarboxylate metabolism
pse00670
One carbon pool by folate
pse00680
Methane metabolism
pse01100
Metabolic pathways
pse01110
Biosynthesis of secondary metabolites
pse01120
Microbial metabolism in diverse environments
pse01200
Carbon metabolism
pse01230
Biosynthesis of amino acids
pse01240
Biosynthesis of cofactors
pse04981
Folate transport and metabolism
Module
pse_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NH8B_2479 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NH8B_2479 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH8B_2479 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NH8B_2479 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NH8B_2479 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NH8B_2479 (glyA)
Enzymes [BR:
pse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NH8B_2479 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAK77293
UniProt:
G2J5E8
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All DBs
Position
2608483..2609778
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AA seq
431 aa
AA seq
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MNENARFFSEPLMSRDPVIASEIALELRRQQTQIELIASENLVSAAVMEAQGTVLTNKYA
EGYPSKRYYGGCEHVDRVEALAIDRVKALFDAEYANVQPHSGAQANGAVMLALLQPGDTV
MGMSLDAGGHLTHGARPALSGKWFNAVQYGVSPDTFRIDYDQVRRLAEEHRPKLIIAGYS
AYPRALDFARFREIADSVGAMLMVDMAHIAGIVAAGRHPNPVHFADVVTSTTHKTLRGPR
GGFILTNNGDIAKKINSAVFPGLQGGPLLHVIAGKAVAFGEALRSEFTTYIDRVLRNAQA
LGNVLKSGGLNLVTDGTDNHLLLVDLRAKRLTGTQAEKALERAGITCNKNGIPFDTENPT
VTSGIRLGTPAGTSRGFGTAQFEEIGEMVLEVLSGLERDPSGDDHIERAVRSQVRDLCGQ
FPIYPHSEIHI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagaacgcgcgttttttttccgaaccactcatgagccgtgaccccgttatcgca
tcggagatcgcgctggaattgcgtcgccagcaaacccagatcgaattgattgcttcggaa
aacctcgtatcggcagcagtcatggaggcacaaggcaccgtgctgaccaacaagtacgca
gagggatacccgtcgaagcgctattacggtggctgcgaacacgtggaccgggtggaggca
ttggcgatcgaccgcgtgaaagcgctgttcgacgccgagtatgcaaacgttcagcctcat
tccggagcgcaagccaatggagcggtgatgcttgcgcttcttcaaccgggcgacaccgtc
atggggatgtcgctggatgccggtggccatctcacccatggtgcgcgccccgctctctcc
ggcaagtggttcaacgctgtccagtacggtgtcagcccggatacgttccgtatcgactat
gaccaggtccggcgcttggccgaggagcatcgtcccaagctgatcattgccggctattcc
gcctatccgcgcgcgctcgattttgccaggttccgcgagatcgccgacagcgttggcgcc
atgctgatggtggatatggcacatatcgccggtatcgtggcggccggccggcacccaaac
ccggtgcattttgccgatgtggtcacgtccacgacacacaagacgcttcgtggaccgcga
ggcggttttatcctcaccaataacggcgacatcgccaagaagatcaattcggcggtgttc
cctggcttgcagggtggcccgctcctgcatgtcatcgcgggcaaggccgtcgcctttggc
gaagcgctgcgctcggaattcacgacctatatcgaccgggtgctgcgcaatgcccaggca
ctcggcaatgtcctgaagtcgggaggcctgaacctggtcaccgacgggaccgacaaccac
ctgttactggtcgatctgcgtgcaaagcgcctcaccggcacgcaggccgaaaaggcgttg
gagcgtgccggtatcacctgcaacaagaacggcatccccttcgatacggaaaatccgacc
gtgacctccggaatccggcttggaacgcccgccggcacaagccgtggcttcggcacggca
cagtttgaagagatcggcgagatggttctggaagtgctgtcgggacttgagcgcgatcct
tccggtgacgatcatatcgaacgtgccgtgcgaagccaggtaagggacttgtgcggccag
ttccctatctatccgcattcggaaatacacatttaa
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