Pseudogulbenkiania sp. NH8B: NH8B_3078
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Entry
NH8B_3078 CDS
T01619
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse00906
Carotenoid biosynthesis
pse01100
Metabolic pathways
pse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NH8B_3078 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pse01006
]
NH8B_3078 (hpnD)
Enzymes [BR:
pse01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
NH8B_3078 (hpnD)
Prenyltransferases [BR:
pse01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NH8B_3078 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
CTP_synth_N
WKTW_rpt
Motif
Other DBs
NCBI-ProteinID:
BAK77864
UniProt:
G2IXD1
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All DBs
Position
complement(3252322..3253167)
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AA seq
281 aa
AA seq
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MTPDQYCQDKAASSGSSFYYSFRFLPEERRRAITALYAFCREVDDVVDECHDENVARTKL
AWWRAELVRLYAGQPQHPVTQALQPHVAAYGLPQKLLEEIIDGMEMDLDFARYDRFADLL
LYCHRAAGVVGQLSAQIFGYTDQHTLKYAHELGVAFQLTNIIRDVGEDARRGRIYLPVEE
LRRFNVPASDIQHYRETEAFRQLMDFQIERAEQYYRQAWEQLPKSDVKAQRPGLLMAAIY
RATLAEIKLDGPQKVLNQRLSLTPIRKLWLAWKTWVFGYQP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcccgaccaatattgccaagacaaggccgcttccagcggttccagcttctattac
agtttccgtttcttgccggaggagcggcggcgcgccatcaccgcgctctatgccttctgc
cgcgaggtggatgatgtggtcgacgaatgccatgacgaaaacgtggcgcggaccaaactg
gcctggtggcgggcggagctggtccgcctctacgccggccaaccccagcatccggtgacg
caggcgctgcaaccgcacgtggcggcctacggcctgccgcagaagttgctggaagagatc
atcgacggcatggagatggacctcgacttcgcccgctacgaccgttttgccgatctgctg
ctgtactgccaccgtgccgccggggtggtggggcagttgtcggcgcagattttcggctac
accgaccagcacacgctgaagtacgcacacgagctcggggtggcgttccagctcaccaac
atcatccgcgacgtcggcgaggatgcccggcgcggacgtatctacttgccggtcgaggaa
ctgcgccgcttcaacgtgccggcctccgacatccagcactaccgcgaaaccgaagcgttc
cgccaattgatggattttcagatcgagcgcgccgagcagtattaccgccaggcttgggaa
cagttgccgaagagcgacgtcaaggcgcagcgtcccggcctgttgatggcggcgatctac
cgcgccaccctggccgagatcaaactcgacggcccgcagaaggtgctcaaccagcgcctg
tcgctgaccccaatccgcaagctgtggctggcgtggaaaacctgggtgttcggctaccag
ccgtga
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