Pseudogulbenkiania sp. NH8B: NH8B_3108
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Entry
NH8B_3108 CDS
T01619
Name
(GenBank) polyamine ABC transporter, periplasmic polyamine-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NH8B_3108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pse02000
]
NH8B_3108
Transporters [BR:
pse02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NH8B_3108
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
BAK77889
UniProt:
G2IXF6
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All DBs
Position
complement(3276407..3277444)
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AA seq
345 aa
AA seq
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MKNVTKKIIVTAVLGGVSLSALAAESLTVISFGGANKEAQATAYYQPYEKATGTKITAGD
YNGEMAKVKAMVEVGRPTWDVLEVESPELLRGCEEGIFEKINWAQVGNKADFVKPAVSEC
GVGIFVWSTALAYNADKLKAAPTSWKDFWDVKKFPGKRGLRKGAKYTLEFALLADGVPAS
DVYKVLGTKAGVDRAFKKLDQLKPNIQWWEAGAQPPQFLASGDVVMSSAYNGRIDAAQKE
GKNLKVVWNGSIYDVDSWAIPKGAKVKEAMKFINFASKPENQKNYSAHIAYGPTNLKTVK
QMDAKLVANLPTAPANLKGALALDVPFWVEHGEDLEERFNAWAAR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgttaccaagaaaatcatcgttaccgctgtgctgggcggggtttcgctgtcg
gctctggctgccgaaagcctgaccgtcatttctttcggcggggcgaacaaggaggcccag
gccaccgcttactaccagccgtacgagaaggcgaccggcaccaagatcaccgcgggggac
tacaacggtgaaatggccaaggtgaaggccatggtggaagtgggccgtccgacctgggac
gtgctcgaagtggaatcgccggagctgctgcgcggctgtgaagagggcatcttcgagaag
atcaactgggcccaggtgggcaacaaggccgacttcgtcaagccggcggtttccgagtgc
ggcgtgggcatcttcgtgtggtcgaccgccctggcctacaacgccgacaagctgaaggcg
gcgccgacctcctggaaggatttctgggacgtgaagaaattcccgggcaagcgcggcctg
cgcaagggcgccaagtacacgctggaattcgccctgctggccgacggcgtgccggcctcc
gacgtctacaaggtgctgggcaccaaggccggcgtggaccgggccttcaagaagctcgac
cagctgaagccgaacatccagtggtgggaagccggcgcccagccgccgcaattcctggcc
tccggcgacgtggtgatgagctcggcctataacggccgcatcgacgccgcgcagaaggaa
ggcaagaacctgaaagtggtgtggaacggcagcatctacgacgtcgattcctgggcgatt
ccgaagggcgccaaggtgaaggaggcgatgaagttcatcaacttcgccagcaagccggaa
aaccagaagaactactcggcgcacatcgcctacggcccgaccaacctgaagacggtcaag
cagatggacgccaagctggtggccaacctgccgaccgctccggccaacctgaaaggggcg
ctggcgctggacgtaccgttctgggttgagcatggcgaagacctggaagagcgtttcaac
gcctgggctgcacgctga
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