Pseudogulbenkiania sp. NH8B: NH8B_3268
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Entry
NH8B_3268 CDS
T01619
Name
(GenBank) phage SPO1 DNA polymerase domain protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NH8B_3268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_3268
Enzymes [BR:
pse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NH8B_3268
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NH8B_3268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAK78034
UniProt:
G2IYB3
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All DBs
Position
3449068..3449922
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AA seq
284 aa
AA seq
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MSRRHLIGEVIGLGPLWRARDARFDDHPARRVSPPAAPLADAPVEAATAETAPVPVAAAV
PVPTAVQAATSAPAPAAPVPAVLTEQAAPSLPTPAKPVLSWDELEQTVARCSHCRLCETR
TQTVFGRGNPQARWLIIGEAPGEQEDKQGKPFVGRAGQLLDNMLAAIGLDSNHDVYIANV
LKCRPPGNRNPSADEIVACQDYLRQQIAHIRPTLILALGRFAAQTLLDSNDSIARLRGRV
HRYQDVPLIVSFHPAYLLRNLPDKAKSWQDLVFARRTFRQLTGQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgccatctgatcggtgaggtcatcggcctcggcccgctgtggcgcgcgcgc
gacgcacgctttgacgaccacccggctcggcgcgtatcgccgccggccgcgcccttggcc
gacgccccggtagaagcggcaacggcagaaaccgcccccgttcctgtcgccgccgccgtc
ccggtgcccactgccgtccaggcggccacctcggcacccgcccctgccgcaccagttccg
gcggtactcaccgaacaggcggccccctccctccccacgccggccaagcctgtgctgagc
tgggacgagctggagcagaccgtcgcccgctgcagtcactgccgcttgtgcgagacgcgc
acccagacggtgttcggccgcggcaatccacaggcgcgctggctgatcatcggggaagcg
ccgggtgaacaagaggacaaacagggcaagccattcgtcggccgcgccggccaactgctc
gacaacatgctggccgccatcggtctcgacagcaaccacgatgtctacatcgccaacgtg
ctcaaatgccgccctcccggcaaccgcaatccttcggccgatgagatcgtagcctgccag
gattacctgcgtcagcagattgcgcacatccgcccgaccctgatcctggcgctgggacgc
ttcgccgcgcagaccctgctcgacagcaacgacagcatcgcgcgcctgcgcggccgggtg
catcgctaccaggatgtgccgctaatcgtcagcttccacccggcctacctgctgcgcaat
ctgcccgacaaggccaagagctggcaggacctggtgttcgcgcggcgcaccttccgccaa
ctcaccgggcagtga
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