Pseudogulbenkiania sp. NH8B: NH8B_3347
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Entry
NH8B_3347 CDS
T01619
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NH8B_3347 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_3347 (xseA)
Enzymes [BR:
pse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NH8B_3347 (xseA)
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NH8B_3347 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2000
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BAK78108
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All DBs
Position
3519330..3520685
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AA seq
451 aa
AA seq
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MIFDQTHNDVISVSALNRMARDLLESGLPALWIGGEISNLTLAASGHAYFLLKDGSAQIR
CVMFRHKLAGLGFRPGEGMQVELKGLVTLYEARGEYQINIDSMRSAGLGRLFEAYEKLKQ
KLTAEGLFDAARKRPIPAHPAAIGIVTSPAAAALRDVVTTLRRRMPSIPVILYPSQVQGQ
GSAEQLAAAIQRAGERREVDVLIVCRGGGSIEDLWSFNEEGVARAIAACPIPVVSGVGHE
TDFTISDFVADRRAPTPTAAAELVSPSREHLQGQVELARRHLARALGRLLTDKAQRLDFL
SRRLKHPGEHLRRQRESLRLAEDRLRRHVQGLLEQRRWRLQLAESRLRRHRPDLAQHVQQ
LDRLSEALHRAGDGWVGRHRLTLVRLAGTLEAMNPQAVLERGYAIVQKADGRAVRSPLEL
LNHERVTLQLAEGRTEAIIDHPAGAQPELPF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgaccaaacccataacgacgtcatcagcgtctcggcactcaaccgcatggcg
cgcgacctgctggaaagtggtctgccggcgctatggatcggcggcgaaatttccaacctg
acgctggccgcctcgggtcacgcctatttcctgttgaaagacggcagcgcgcagatccgc
tgcgtgatgttccgccacaagctggccgggctcggctttcgccccggcgagggcatgcag
gtcgagctcaagggcctggtgacgctgtacgaggcgcgcggcgaataccagatcaacatc
gacagcatgcgctcggccggcctcggccgcctgttcgaggcctacgagaaactgaagcag
aagctgactgcggaaggcctgttcgacgccgcccgcaagcggccgatcccggcgcacccg
gccgccatcggcatcgtcacctcgccggccgcggccgcgctgcgcgacgtggtgaccacg
ctgcgccggcgcatgccgagcatcccggtcatcctctacccgtcccaggtgcagggccag
ggctcggccgagcaactggccgccgcgatccagcgggccggcgagcggcgcgaggtggac
gtgctgatcgtctgccgcggcggcggcagcatcgaggacctgtggtcgttcaacgaggaa
ggggtggcgcgtgccatcgccgcctgcccgatcccggtggtcagcggcgtcggccacgaa
accgacttcaccatcagcgacttcgtcgccgaccgccgcgcgccgaccccgaccgcggcc
gccgagctggtctcgcccagccgcgaacacctgcagggccaggtcgaactggcgcggcgc
cacctggcgcgggcgctgggccggctgctcaccgacaaggcgcagcggcttgacttcctg
tcgcgccggctcaagcaccccggcgagcacctgcgccgtcagcgcgaatcgctaaggttg
gccgaagaccggctgcggcggcacgtgcagggactgctcgagcaacgccgctggcgcctg
cagttggccgagagccggcttcgacgccaccgtccggacctggcgcagcacgtccagcaa
ctcgaccgcctgagcgaagcgctgcaccgcgccggcgacggctgggtgggcaggcatcgg
ctgacgctggtgcgactggccggcacgctggaggcgatgaacccgcaggcggtgctggag
cggggctacgccatcgtgcagaaggccgacgggcgcgccgtgcgctcgccgctggagctg
ctcaaccacgagcgcgtgacgctgcagttggccgaaggccgcaccgaagccatcatcgac
caccccgccggcgcccagccggaactgccgttctga
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