Pseudogulbenkiania sp. NH8B: NH8B_3535
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Entry
NH8B_3535 CDS
T01619
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NH8B_3535 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pse03019
]
NH8B_3535 (groEL)
03110 Chaperones and folding catalysts [BR:
pse03110
]
NH8B_3535 (groEL)
03029 Mitochondrial biogenesis [BR:
pse03029
]
NH8B_3535 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pse04147
]
NH8B_3535 (groEL)
Enzymes [BR:
pse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NH8B_3535 (groEL)
Messenger RNA biogenesis [BR:
pse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NH8B_3535 (groEL)
Chaperones and folding catalysts [BR:
pse03110
]
Heat shock proteins
HSP60 / Chaperonin
NH8B_3535 (groEL)
Mitochondrial biogenesis [BR:
pse03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NH8B_3535 (groEL)
Exosome [BR:
pse04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NH8B_3535 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
NH8B_3535 (groEL)
Exosomal proteins of breast cancer cells
NH8B_3535 (groEL)
Exosomal proteins of colorectal cancer cells
NH8B_3535 (groEL)
Exosomal proteins of bladder cancer cells
NH8B_3535 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAK78286
LinkDB
All DBs
Position
complement(3705628..3707265)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGDSARAKMVNGVNILADAVKVTLGPKGRNVVLDRSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGI
DKAVVALVGELAKIAKPCTTSKEIAQVGSISANSDLDIGQIIADAMEKVGKEGVITVEDG
KSLSNELDVVEGMQFDRGYLSPYFINNQEKQIAALDNPFVLLFDKKISNIRDLLPVLEQV
AKASRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLQDIATLTGGTV
IAEEVGLTLEKVTLDMLGQAKRIEVGKENTIIIDGVGEHAAIQARVGEIRRQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAIL
RARATLESLVTDNVDQDAGVKIVLKAIEAPLRQIVQNAGDEPSVVVNKVLEGKGNFGYNA
ASGEYGDMIEMGVLDPAKVTRTALQHAASVSGLMLTTDCMIAELPEDKPAAPMGGMGGMG
MDGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaattcggtgattccgctcgtgccaaaatggtcaacggtgtg
aacatcctggctgacgccgtcaaagtgaccctgggcccgaaaggccgcaacgtggtgctg
gaccgctccttcggcgcgccgaccatcaccaaggacggcgtgtccgtcgccaaggaaatc
gaactgaaggacaagttcgagaacatgggcgcccagatggtcaaggaagtggcttccaag
acctccgacgtggccggtgacggtaccaccaccgcaaccgtgctggcgcaggccatcgtg
caggaaggcatgaagttcgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgttgtggccctggtcggcgagctggccaagatcgccaagccgtgcaccacc
tccaaggaaatcgcccaggtgggttcgatctccgccaactccgacctggacatcggccag
atcatcgccgacgccatggaaaaggtgggcaaggaaggcgtgatcaccgttgaagacggc
aagtcgctgagcaacgagctggacgtggtggaaggcatgcagttcgaccgcggttacctg
tccccgtacttcatcaacaaccaggaaaaacagatcgctgcactggacaacccgttcgtg
ctgctgttcgacaagaagatttccaacatccgcgacctgctgccggtgctggagcaagtt
gccaaggctagccgcccgctgctgatcattgccgaagacgtcgaaggcgaagcgctggcc
acgctggtggtgaacaccatccgcggcatcctgaaagtggtggccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgctaccctgaccggcggtaccgtg
atcgccgaagaagtgggcctgaccctggaaaaagtcaccctcgacatgctgggccaagcc
aagcgtatcgaagtgggcaaggaaaacaccatcatcatcgacggtgtgggtgagcacgct
gccatccaggctcgcgttggcgaaatccgccgccagatcgaagaagctacttccgattac
gaccgtgaaaaactgcaagagcgcgtggccaagctggccggcggcgttgccgtgatcaag
gtcggtgccgctaccgaagtggaaatgaaagagaagaaggcccgtgtcgaagacgcgctg
cacgcgacccgtgctgccgtggaagaaggcgtggtgcctggcggtggcgtggccatcctg
cgcgcccgcgctaccctggagtcgctggtgaccgacaacgtcgatcaggacgccggcgtc
aagatcgtgctgaaggccatcgaagccccgctgcgccagatcgttcagaacgccggcgac
gagccgtcggttgtcgtgaacaaggtgctggaaggcaagggtaacttcggttacaacgct
gccagcggcgagtacggtgacatgatcgagatgggtgtgttggatccggctaaggtgacc
cgtaccgctctgcaacacgcggcttcggtttccggtctgatgctgaccaccgactgcatg
atcgccgaactgccggaagacaagccggctgccccgatgggcggcatgggcggcatgggc
atggacggcatgatgtaa
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