Pseudogulbenkiania sp. NH8B: NH8B_3604
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Entry
NH8B_3604 CDS
T01619
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NH8B_3604 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_3604 (recC)
Enzymes [BR:
pse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NH8B_3604 (recC)
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NH8B_3604 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BAK78353
UniProt:
G2J054
LinkDB
All DBs
Position
complement(3786441..3789626)
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AA seq
1061 aa
AA seq
DB search
MLHLYQSNRLEALGELFTGMSRAMPLSDPFQPETVLVQSRGMGRWLTLELAGRAGIAANL
DFVLPAAFAWRLMQAVLPGLPRKSSFAPEVLQWRLLELLPTLHGAPFTPLVRYLEGGEAA
GFELAGKIADIFDQYLVFRPDWIRAWERGELLDLGEDEAWQAVLWQRLAEADPGRHRVRL
LDDFLGGLRPEHLPERVSLFGIASLAPMYLAMIKRLAALTDVCVFLLNPCEAYWGDIVDA
RGQLKLFQQGMAAHDDHPLLASLGKQGRDFFDQIAEEMPEGHPLFLEPHGDTLLARLQRD
ILTLTPPGATPAPAAPGDRSIELNAVHSPMRELEVLKDRLLARFAADPTLTPADVAVLTP
DINAYAPYIDAVFGQRDDAPNIPYTVADRRIEREEPLLATFAAVLRLADSRFGADAVLAL
LDCDALLARFGLADAEVPLLQQWVRESGIRWGRDAAHKAALGLPADPLYTWRWGLDRLLL
GTVLPPALAGDASPLFGGLLPAAGAEGQLAETLARFGQLFDVLDGCARAWAEPASPAVWR
ARLQGVVEALFAVDEAGEAALTLLFDALAELAEDAQLAAFDAPVGLAVVRDWLTRRLTLS
APSGFLAGGVTFCAMVPMRSIPFRVLCLIGMNDGAYPRDERPVSFDLVARHPRRGDRSRR
FDDRYLFLEALLSAREALYLSWVGRSVRTDEPLPPSPLVAELLDTLARMAGCAVEVVQHP
LQPFARAAFDGSDPRRHSFEPSYAAALAAPRHEPAPFAVALPGGDATVLRLDELLRFWRH
PARAWLADRLGVKLAGSAEDVPVREPFTVERDTRETLRRELVGALLASRPLAPVKDKLVG
AGLLPPAALGQAWLAEETTASVRFARRLPPELAQPLRAPESVELMLDGVTLVGELSGLRD
AGLLRVVARKAYAGELIELWLSHLVLCTARPAGVAPYSALYDEEGVHELCDEPDAAELLR
PWLARWQQGQRQPLPFFARTSWAYARSQVEKPDQPEAALAKAQAEWDPAYDGKTPQKDEA
AIRLAFRHLDPLAEPLFAQLADTLLLPLAIRLLGAAEGDQA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctctaccagtccaaccgtctcgaagcgctgggggaactgttcaccggcatg
agccgtgccatgcccctgtccgacccgttccagccggagacggtgctggtgcagagccgc
ggcatggggcgctggctgacgctggagctggccgggcgcgccggcatcgccgccaacctc
gacttcgtgctgccggcggccttcgcctggcgcctgatgcaggcggtgctgccggggctg
ccgcgcaagtcgtcgttcgcgcccgaggtgctgcagtggcggctgctggaactgttgccg
accttgcacggcgcgccgttcacgccgctggtgcgctacctggagggcggcgaggcggcg
ggcttcgagctggccggcaagattgccgacatcttcgaccagtacctggtgttccgcccc
gactggatccgcgcctgggagcgcggcgagctgttggacttgggcgaggacgaggcgtgg
caggcggtgttgtggcaaaggttggccgaagccgaccccggccgccaccgcgtgcgcctg
ctcgacgacttcctcggcgggctgcgcccggagcacctgccggagcgcgtcagcctgttc
ggcatcgccagcctggcgccgatgtacctggccatgatcaagcgcctggcggcgctgacc
gacgtctgcgtgttcctgctcaacccctgcgaggcttactggggcgacatcgtcgacgcg
cgcggccagctcaagctgttccagcagggcatggcggcgcacgacgaccacccgctgctg
gcctcgctcggcaagcagggacgggactttttcgaccagatcgccgaggagatgcccgag
ggccacccgctgttcctcgaaccgcacggcgacaccctgctcgcacggttgcagcgcgac
atcctgacgctgaccccgcccggcgcgacgcccgcaccggcggcccccggcgaccgctcg
atcgagctcaacgccgtgcacagcccgatgcgcgagctggaggtgctgaaggaccgcctc
ttggcgcgcttcgccgccgacccgacgctgaccccggccgacgtcgcggtgctgacgccg
gacatcaacgcctacgcgccctacatcgacgcggtgttcggccaacgtgacgacgcgccc
aacatcccctacaccgtcgccgaccgccgcatcgagcgcgaggagccgctgttggccacc
ttcgccgcggtgctgcggctggccgactcgcgtttcggcgccgacgcggtgctggcgctg
ctggactgcgacgcgctgctggcgcgcttcggccttgccgacgccgaggtgccgctgctg
cagcaatgggtgcgcgaatccggcatccgctgggggcgcgacgccgcgcacaaggcggcg
ctcgggctgccggccgacccgctctacacctggcgctgggggctcgaccgcttgctgctg
ggcacggtgctgccgcctgcgctggcgggcgacgcctcgcccttgttcggcggcctgctg
ccggcggccggcgcggaagggcaactggccgagacgctggcgcgcttcggccaactgttc
gacgtgctcgacggctgcgcgcgcgcctgggccgagccggccagccccgccgtctggcgc
gcgcggctgcaaggggtggtggaggcgctgttcgccgtggacgaggccggcgaggcggcg
ctgacgctgctgttcgacgccctggccgaactcgccgaggacgcccaactcgccgccttc
gacgccccggtcgggctcgcggtggtgcgcgactggctgacgcggcgcctgacgctgtcg
gcaccttccggctttctcgccggtggcgtcaccttctgcgccatggtgccgatgcgctcg
atcccgtttcgcgtgctgtgcctgatcggcatgaacgacggcgcctacccgcgcgacgag
cgcccggtcagcttcgacctggtggcgcgccacccgcgccgcggcgaccgctcgcgccgt
ttcgacgaccgctacctgttcctcgaggcgctgctgtcggcgcgcgaggcgctctacctg
tcctgggtcgggcgctcggtgcgcaccgatgagccgctgccgccgtcgccgctggtggcc
gagctgctcgacaccctggccaggatggccggctgcgccgtcgaggtggtgcagcacccg
ctgcagccgttcgcgcgcgccgccttcgacggcagcgacccgcgccgccacagcttcgag
ccgagctacgccgccgcgctcgccgccccgcgccacgagccggcgccgttcgccgtggcg
ctgccgggcggcgacgccacggtgctgcgcctcgacgagctgctgcgcttctggcgccac
ccggcgcgcgcctggctggccgaccggctcggcgtcaagctcgccggcagcgccgaggac
gtgccggtgcgcgaaccgttcaccgtcgagcgcgacacgcgcgagacgctgcggcgcgag
ctggtcggcgcgctgctggcgtcgcgtccgctggccccggtcaaggacaagctggtcggc
gccggcctgctgccgccggcggcgctggggcaggcctggctcgccgaggaaaccaccgcc
agcgtgcgcttcgcgcgccgcctgccgccggaactggcgcagccgctgcgcgcgccggag
agcgtcgagctgatgctggacggcgtgacgctggtgggcgaactgtccggcctgcgcgac
gccggcctgctgcgcgtggtggcgcgcaaggcctacgccggcgagctgatcgagctgtgg
ctgagccatctggtattgtgtacggcacgcccggccggggtggcgccgtactcggccttg
tacgacgaggaaggggtacacgaactctgcgacgagcccgacgccgccgagctgctgcga
ccgtggctggcgcgctggcagcagggccagcgccagccgctgccgttcttcgcccgcacc
agctgggcctacgccaggagccaggtcgagaagcccgaccagcccgaggcggcactggcc
aaggcgcaggcggagtgggacccggcctacgacggcaagaccccgcagaaggacgaggcg
gcgatccgcctcgccttccgccatctcgacccgctggccgagccgctgttcgcgcagctg
gccgacaccctgctgctgccgctggccatacgcctgctgggcgcggcggaaggagaccaa
gcatga
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