Pseudogulbenkiania sp. NH8B: NH8B_3742
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Entry
NH8B_3742 CDS
T01619
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03030
DNA replication
pse03410
Base excision repair
pse03420
Nucleotide excision repair
pse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NH8B_3742 (polA)
03410 Base excision repair
NH8B_3742 (polA)
03420 Nucleotide excision repair
NH8B_3742 (polA)
03440 Homologous recombination
NH8B_3742 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pse03032
]
NH8B_3742 (polA)
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_3742 (polA)
Enzymes [BR:
pse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NH8B_3742 (polA)
DNA replication proteins [BR:
pse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NH8B_3742 (polA)
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NH8B_3742 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NH8B_3742 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAK78490
LinkDB
All DBs
Position
complement(3930470..3933133)
Genome browser
AA seq
887 aa
AA seq
DB search
MVNMLRRLEKEVRFDYSACVFDAKGKTFRDELYPDYKANRPSMPEELASQITAVHDVVQA
SGWPILVVDGVEADDVIGTLTRQAEAAGMQVIVSTGDKDIAQLVSPVVTLVNTMTNETLD
EGGVKEKFGVPPNLIIDYLTLIGDKVDNVPGVDKCGPKTAVKWLEQYGSLEAVMANAAAI
SGKVGDNLRAALDWLPKGRELITIKCDVPLDAEMPQGMETLLHRERDKPKLIELFTRFGF
RSWLREVSDANGSVTADAAAPASANPGVNGELFGAAEDDEAPAAAVERRYETILTAAQLD
AWLAKLEAAPVVSLDTETTSLDQMEARLVGMSFSVTEGEAAYLPLAHHYAGVPEQLDLDA
TLARLKPWLENPARKKLGQNLKYDRHVLANHGIALAGVADDTLLASYVIESHLTHNMDDL
AQRHLGESTVSYEEICGKGAKQIGFAEVDIAVASNYAAEDADITLRLNRALAGKLEGRLA
SVYRDIELPVAEVLFAMERNGVLIDRQRLAEQSHQLGSQMLQLEQEAYQQAGQPFNLNSP
KQLQEILFGKLGIDTKGVKKTPSGGFSTDESVLEQLALDHPLPKLILQYRGLAKLKSTYT
DKLPSLIRPDTGRVHTNYAQAVAITGRLASSDPNLQNIPVRTAEGRRVREAFIAPPGHRI
VSADYSQIELRIMAHLSDDANMLAAFASGEDIHKTTAAEVFGVTREQVTSEQRRAAKAIN
FGLIYGMSAFGLAAQLDIERNAAQQYIDRYFMRFPGVADYMQRTREAAREQGYVETVFGR
RLYLPEIRASNPGRRSGAERAAINAPMQGTAADLIKLAMIAVQRWLVAEGLASKLIMQVH
DELVLEVPEAELARVKQRLPQIMAGVAELKVPLLAEVGAGESWEAAH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacatgctgcgtcgcctggagaaggaggtccggttcgattatagcgcctgcgtt
tttgacgcaaaaggcaagaccttccgcgacgagctctatcccgactacaaagccaaccgg
ccgtcgatgccggaggagctggccagccagattacggcggtgcacgacgtggtgcaagcg
tccggctggccgatcctggtggtggacggcgtcgaggccgacgacgtgatcggcacgctg
acgcgccaggcggaggcggccggcatgcaggtgatcgtctccaccggcgacaaggacatc
gcccagctggtgtcgccggtggtgacgctggtcaacaccatgaccaacgagacgctggac
gagggcggggtgaaggagaagttcggcgtgccgccgaacctcatcatcgactacctgacg
ctgatcggcgacaaggtcgacaacgtgccgggcgtcgacaagtgcggtcccaagaccgcg
gtcaaatggctggaacagtacggctcgctcgaggcggtgatggccaacgccgcggccatc
tccggcaaggtcggcgacaatctgcgcgccgcgctcgactggctgcccaaggggcgcgag
ctgatcaccatcaagtgcgacgtgccgctcgacgccgagatgccgcagggcatggaaacg
ctgttgcaccgcgagcgcgacaagccgaagctgatcgaactgttcacccgtttcggcttc
cgcagctggctgcgcgaggtgagcgacgccaacggcagcgtcacggccgatgccgccgcc
ccggcttcggccaaccccggcgtcaacggcgagctgttcggcgccgccgaggatgacgag
gcgcccgccgccgccgtcgagcgccgttacgagaccatcctcaccgcggcgcagctcgat
gcctggctcgccaagctggaggcggcgccggtggtgtcgctcgacaccgaaaccaccagc
ctcgaccagatggaagcgcgcctggtcggcatgagcttctcggtgacggaaggcgaggcc
gcctacctgccgctggcgcaccactacgccggcgtacccgagcaactcgacctcgacgcc
acgctggcccggctcaagccctggctggagaacccggccaggaagaagctcggccagaac
ctcaagtacgaccgccacgtgctggccaaccacggcatcgcgctggccggcgtggccgac
gacacgctgctggcgtcgtacgtgatcgagagccacctgacgcacaatatggacgacctg
gcgcagcgtcatctgggcgagagcacggtgagctacgaggagatctgcggcaagggcgcc
aagcagatcggtttcgccgaggtcgacatcgcggtggcgtccaactacgccgccgaggac
gccgacatcacgctgcgcctcaaccgggccctggccggcaagctggaaggccgcctggcc
agcgtgtaccgcgacatcgagctgccggtggccgaggtgctgttcgcgatggagcgcaac
ggcgtgctgatcgaccgccaaaggttggccgaacaaagccaccagctcggcagccagatg
ctgcaactggagcaggaggcctaccagcaggccggccagccgttcaacctcaactcgccc
aagcagctgcaggaaatcctgttcggcaagctcggcatcgacaccaagggcgtcaagaag
accccgtccggcggcttctccaccgacgagtcggtgctcgagcagctggcgctcgaccac
ccgctgcccaagctgatcctgcaataccgggggctggccaagctcaagtccacctacacc
gacaagctgccgtcgctgatccgccccgacaccggccgcgtgcacaccaactacgcgcag
gcggtggcgatcaccgggcgcctggcgagctccgaccccaacctgcagaacatcccggtg
cgcaccgccgagggccggcgcgtgcgcgaagccttcatcgcgccgccgggccaccgcatc
gtcagcgccgactactcgcagatcgagctcaggatcatggcgcacctgtcggacgacgcc
aacatgctggcggccttcgccagcggcgaggacatccacaagaccaccgccgccgaggtg
ttcggcgtgacgcgcgagcaggtgacgtcggagcaacgccgcgccgccaaggcgatcaac
ttcggcctgatctacggcatgagcgccttcggcctggccgcccagctcgacatcgagcgc
aacgcggcgcagcagtacatcgaccgctacttcatgcgcttccccggcgtggccgactac
atgcagcgcacccgcgaggcggcgcgcgagcagggctacgtcgagaccgtgttcgggcgc
cgcctctatctgccggagattcgcgccagcaatccgggccggcgcagcggcgccgagcgc
gccgcgatcaacgcgccgatgcagggcaccgccgccgacctgatcaagctggcgatgatc
gcggtgcagcgctggctggtggcggaaggcctggccagcaagctgatcatgcaggtgcac
gacgaactggtactggaagtgccggaagccgaactggcgcgggtcaagcagcggctgccg
cagatcatggccggcgtggccgagctcaaggtgccgctgctggccgaagtgggggccggg
gagagctgggaggcggcgcactga
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