KEGG   Pseudogulbenkiania sp. NH8B: NH8B_3742
Entry
NH8B_3742         CDS       T01619                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pse  Pseudogulbenkiania sp. NH8B
Pathway
pse03030  DNA replication
pse03410  Base excision repair
pse03420  Nucleotide excision repair
pse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NH8B_3742 (polA)
   03410 Base excision repair
    NH8B_3742 (polA)
   03420 Nucleotide excision repair
    NH8B_3742 (polA)
   03440 Homologous recombination
    NH8B_3742 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pse03032]
    NH8B_3742 (polA)
   03400 DNA repair and recombination proteins [BR:pse03400]
    NH8B_3742 (polA)
Enzymes [BR:pse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NH8B_3742 (polA)
DNA replication proteins [BR:pse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NH8B_3742 (polA)
DNA repair and recombination proteins [BR:pse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NH8B_3742 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NH8B_3742 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: BAK78490
LinkDB
Position
complement(3930470..3933133)
AA seq 887 aa
MVNMLRRLEKEVRFDYSACVFDAKGKTFRDELYPDYKANRPSMPEELASQITAVHDVVQA
SGWPILVVDGVEADDVIGTLTRQAEAAGMQVIVSTGDKDIAQLVSPVVTLVNTMTNETLD
EGGVKEKFGVPPNLIIDYLTLIGDKVDNVPGVDKCGPKTAVKWLEQYGSLEAVMANAAAI
SGKVGDNLRAALDWLPKGRELITIKCDVPLDAEMPQGMETLLHRERDKPKLIELFTRFGF
RSWLREVSDANGSVTADAAAPASANPGVNGELFGAAEDDEAPAAAVERRYETILTAAQLD
AWLAKLEAAPVVSLDTETTSLDQMEARLVGMSFSVTEGEAAYLPLAHHYAGVPEQLDLDA
TLARLKPWLENPARKKLGQNLKYDRHVLANHGIALAGVADDTLLASYVIESHLTHNMDDL
AQRHLGESTVSYEEICGKGAKQIGFAEVDIAVASNYAAEDADITLRLNRALAGKLEGRLA
SVYRDIELPVAEVLFAMERNGVLIDRQRLAEQSHQLGSQMLQLEQEAYQQAGQPFNLNSP
KQLQEILFGKLGIDTKGVKKTPSGGFSTDESVLEQLALDHPLPKLILQYRGLAKLKSTYT
DKLPSLIRPDTGRVHTNYAQAVAITGRLASSDPNLQNIPVRTAEGRRVREAFIAPPGHRI
VSADYSQIELRIMAHLSDDANMLAAFASGEDIHKTTAAEVFGVTREQVTSEQRRAAKAIN
FGLIYGMSAFGLAAQLDIERNAAQQYIDRYFMRFPGVADYMQRTREAAREQGYVETVFGR
RLYLPEIRASNPGRRSGAERAAINAPMQGTAADLIKLAMIAVQRWLVAEGLASKLIMQVH
DELVLEVPEAELARVKQRLPQIMAGVAELKVPLLAEVGAGESWEAAH
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggtcaacatgctgcgtcgcctggagaaggaggtccggttcgattatagcgcctgcgtt
tttgacgcaaaaggcaagaccttccgcgacgagctctatcccgactacaaagccaaccgg
ccgtcgatgccggaggagctggccagccagattacggcggtgcacgacgtggtgcaagcg
tccggctggccgatcctggtggtggacggcgtcgaggccgacgacgtgatcggcacgctg
acgcgccaggcggaggcggccggcatgcaggtgatcgtctccaccggcgacaaggacatc
gcccagctggtgtcgccggtggtgacgctggtcaacaccatgaccaacgagacgctggac
gagggcggggtgaaggagaagttcggcgtgccgccgaacctcatcatcgactacctgacg
ctgatcggcgacaaggtcgacaacgtgccgggcgtcgacaagtgcggtcccaagaccgcg
gtcaaatggctggaacagtacggctcgctcgaggcggtgatggccaacgccgcggccatc
tccggcaaggtcggcgacaatctgcgcgccgcgctcgactggctgcccaaggggcgcgag
ctgatcaccatcaagtgcgacgtgccgctcgacgccgagatgccgcagggcatggaaacg
ctgttgcaccgcgagcgcgacaagccgaagctgatcgaactgttcacccgtttcggcttc
cgcagctggctgcgcgaggtgagcgacgccaacggcagcgtcacggccgatgccgccgcc
ccggcttcggccaaccccggcgtcaacggcgagctgttcggcgccgccgaggatgacgag
gcgcccgccgccgccgtcgagcgccgttacgagaccatcctcaccgcggcgcagctcgat
gcctggctcgccaagctggaggcggcgccggtggtgtcgctcgacaccgaaaccaccagc
ctcgaccagatggaagcgcgcctggtcggcatgagcttctcggtgacggaaggcgaggcc
gcctacctgccgctggcgcaccactacgccggcgtacccgagcaactcgacctcgacgcc
acgctggcccggctcaagccctggctggagaacccggccaggaagaagctcggccagaac
ctcaagtacgaccgccacgtgctggccaaccacggcatcgcgctggccggcgtggccgac
gacacgctgctggcgtcgtacgtgatcgagagccacctgacgcacaatatggacgacctg
gcgcagcgtcatctgggcgagagcacggtgagctacgaggagatctgcggcaagggcgcc
aagcagatcggtttcgccgaggtcgacatcgcggtggcgtccaactacgccgccgaggac
gccgacatcacgctgcgcctcaaccgggccctggccggcaagctggaaggccgcctggcc
agcgtgtaccgcgacatcgagctgccggtggccgaggtgctgttcgcgatggagcgcaac
ggcgtgctgatcgaccgccaaaggttggccgaacaaagccaccagctcggcagccagatg
ctgcaactggagcaggaggcctaccagcaggccggccagccgttcaacctcaactcgccc
aagcagctgcaggaaatcctgttcggcaagctcggcatcgacaccaagggcgtcaagaag
accccgtccggcggcttctccaccgacgagtcggtgctcgagcagctggcgctcgaccac
ccgctgcccaagctgatcctgcaataccgggggctggccaagctcaagtccacctacacc
gacaagctgccgtcgctgatccgccccgacaccggccgcgtgcacaccaactacgcgcag
gcggtggcgatcaccgggcgcctggcgagctccgaccccaacctgcagaacatcccggtg
cgcaccgccgagggccggcgcgtgcgcgaagccttcatcgcgccgccgggccaccgcatc
gtcagcgccgactactcgcagatcgagctcaggatcatggcgcacctgtcggacgacgcc
aacatgctggcggccttcgccagcggcgaggacatccacaagaccaccgccgccgaggtg
ttcggcgtgacgcgcgagcaggtgacgtcggagcaacgccgcgccgccaaggcgatcaac
ttcggcctgatctacggcatgagcgccttcggcctggccgcccagctcgacatcgagcgc
aacgcggcgcagcagtacatcgaccgctacttcatgcgcttccccggcgtggccgactac
atgcagcgcacccgcgaggcggcgcgcgagcagggctacgtcgagaccgtgttcgggcgc
cgcctctatctgccggagattcgcgccagcaatccgggccggcgcagcggcgccgagcgc
gccgcgatcaacgcgccgatgcagggcaccgccgccgacctgatcaagctggcgatgatc
gcggtgcagcgctggctggtggcggaaggcctggccagcaagctgatcatgcaggtgcac
gacgaactggtactggaagtgccggaagccgaactggcgcgggtcaagcagcggctgccg
cagatcatggccggcgtggccgagctcaaggtgccgctgctggccgaagtgggggccggg
gagagctgggaggcggcgcactga

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