Pseudogulbenkiania sp. NH8B: NH8B_3904
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Entry
NH8B_3904 CDS
T01619
Symbol
pol_III
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03030
DNA replication
pse03430
Mismatch repair
pse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NH8B_3904 (pol_III)
03430 Mismatch repair
NH8B_3904 (pol_III)
03440 Homologous recombination
NH8B_3904 (pol_III)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pse03032
]
NH8B_3904 (pol_III)
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_3904 (pol_III)
Enzymes [BR:
pse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NH8B_3904 (pol_III)
DNA replication proteins [BR:
pse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NH8B_3904 (pol_III)
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NH8B_3904 (pol_III)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
BAK78651
UniProt:
G2J1W8
LinkDB
All DBs
Position
complement(4095225..4096229)
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AA seq
334 aa
AA seq
DB search
MPALSPDALPAALERGLAPLYLIHGEEALLALEAADALRQAARAQGYLEREVLTVEGGFD
WSQLSEAMGSVSLFASLKLLELRIPGGKPGSEGGEALQRLAEAPPADTVTLVILPKLERV
QLSSKWFAALEKAAVVVHAAAVSRQQLPGWISRRLKAQGLSLSEEALSFFADRVEGNLLA
ARQEVDKLAILHPGGSLDLDAIRDAVANVARFDVFQLSAAWLGGDTVRVTRMLDGLAAEG
EAPVLVLWSFSEDVRMLLKLRQGLKDGRQVRDLTRELKLWGDKQRLAEPALRRIGPRTLM
AALADCARIDRLIKGVEPGDAWAALKALGARLAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccggcactcagccctgacgccctgcccgccgcgctggagcgcggcctggcgccgctc
tacctgatccacggcgaagaggcgctgctggcgctggaggcggccgacgcgctgcgccag
gcggcgcgggcgcagggctacctcgaacgcgaggtgctgacggtggagggcggcttcgac
tggtcgcagctgagcgaggcgatgggcagcgtgtcgctgttcgcctcgctcaagctgctg
gagctgcgtattcccggcggcaagcccggcagcgaaggcggcgaggcgttgcaaaggttg
gccgaagccccgccggccgacaccgtgaccctggtgatcctgcccaagctcgagcgcgtg
caactctccagcaagtggttcgccgcgctggaaaaggccgcggtggtggtgcacgccgcg
gcggtgagccggcagcagctgccgggctggatcagccgccgcctcaaggcgcaggggctg
agcctgagcgaggaggcgttgagcttctttgccgaccgcgtcgaaggcaacctgctggcg
gcgcgccaggaggtcgacaagctcgccatcctccaccccggcggcagcctcgacctggac
gccatccgggatgccgtggccaacgtggcgcgtttcgacgtgttccagctgtcggcggcc
tggctgggcggcgacacggtgcgggtgacgcgcatgctcgacggcctggcggcggagggc
gaggcgccggtgctggtgttgtggtcgttcagcgaagacgtgcgcatgctgctcaagctg
cgccaagggctgaaggatggccgccaggtgcgcgacctcacgcgcgagctcaagctgtgg
ggcgacaagcagcgcctggccgagccggcgctgcgccgcatcgggccgcgcacgctgatg
gcggcgctggccgactgcgcgcgcatcgaccgcctgatcaagggggtcgagcccggcgac
gcctgggcggcgctgaaggcgctgggcgcccgcctggcggcctga
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