Pseudogulbenkiania sp. NH8B: NH8B_4020
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Entry
NH8B_4020 CDS
T01619
Name
(GenBank) SNF2 family DNA helicase
Organism
pse
Pseudogulbenkiania sp. NH8B
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DUF2267
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
BAK78757
UniProt:
G2J274
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Position
complement(4212441..4216553)
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AA seq
1370 aa
AA seq
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MTDSFSHHIEPALTPAHQALLAVLALLPGGETKANLLTLLHRAEVRDAHGKELDSVRLGT
LLAELENRQWIVRTPGLPYRLVPAARNAALLPLLQDRRELARWSKRLPEHLGSRQANWGA
ADPAQCQLQLWLAVLAGQARPAQRWLAQLHELQQRSGQTPPAPAKRLFADAAGRALFDGL
ADDVQVTLLLDYLPEACWRFDGFRHGYDYALSRWDSGYSEWDELAEWLLRQALWRGDGER
VALFGRLGNSLGGALSALLLQGSYGAALAHLDAWRDERKAETRQRKLDLPAELHALYCLA
LLGAADPARQAELKQAIQHGIKHNLGQSYGLLQHLVALQEGVAVPAYLGLPEQIHLAGLD
GLMLALALYWLDARQATSTAWQATLHAFRERMQQEGYQRVVEELEALLERQFGEPRSTPD
WHSRHGARPLLELYQRREAWQHALTALSSLAPGKAAEARQAAPNPTRLAWFVSAGRHGVL
LEPREQKLGAKGQWSKGRAVALKRLLDEADSADYLLEQDRNVMRHIQRSYDGYYGGSSYE
LDGEKALPALVGHPALFWADAPDVRIDVAAGQVALQLKESGAHIQLKLTPARVGADSEVV
WEKDTPTRLVVYPVSKEIRQIAAIVGKELTVPLAAKAQLMEAITSIAPLVPIHSDLPELA
AHIDTVPADARLYAHLLPLEQGLRLQLLMRPLPGGAWCKPGQGLENLVGEVDGKALQTRR
DLKQEKQALQAVLDACPALAQADGDGQEWQLAEPQAALEVLSELQAVDPATLECVWPEGE
RMRIKARRGLAQMKFGLQKQGDWFVLSGDLELDDGRVLQLRQLLELLQANPGRFLKLGEQ
DWLALTDAMRRRLDELALVADHVGKDGAIRLSALTAPLLAELEQEAGQFEADAAWREQLA
ALASLGDYQPTPPSTLQAELRDYQLEGYAWLARLARWGVGACLADDMGLGKTVQTLALLL
ERAPAGPQLVVAPTSVALNWLAEAARFAPTLKVRSYQQQRALDTLAPFDLVVVSYGLLQQ
DADAFAAVPWTSVVLDEAQAIKNAGTKRAQAVLGLQAGFKLAASGTPVENHLGELWSLFR
FLNPGLLGSQERFNQRFAVPVERGDKNARKALKTLIQPFILRRTKSQVLDELPPRTEITF
KVALSGDELHLYEALRQQAVDKLDALGEEDNKPLKVLAEITRLRRFCCHPRLALPDSELA
GSKLKAFAEIADELLDNRHKALVFSQFVDHLAIVRAWLDERGIAYQYLDGSTPARERKAR
VDAFQAGQGDLFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAHRMGQQRPVT
VYRLVAEHTIEEQIVALHAAKRDLADSLLEGGELSAKLDAGALLQLLKGG
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcgttttctcaccacatcgagcccgcgctcacccctgcccaccaggcgctg
ctggccgtgctggcgctgctgcccggcggcgagaccaaggccaacctgctgaccctgctg
caccgcgccgaagtacgcgacgcccacggcaaggagctcgacagcgtgcgcctcggcacc
ctgctggccgagctggagaaccggcagtggatcgtgcgcacccccggcctgccctaccgc
ctggtgccggcggcgcgcaacgccgccttgctgcccttgctgcaggaccggcgcgaactg
gcgcgctggagcaagcggctgccggagcacctcggcagccgccaggcgaactggggcgcc
gcggacccggcgcagtgccagctgcagctgtggctcgccgtgctcgcgggccaggccagg
ccggcgcagcgctggctcgcgcagttgcacgagctgcagcaacgcagcgggcagacgccg
ccggcgccggccaagcggctgttcgccgacgccgccgggcgcgccctgttcgacggcctg
gccgacgacgtgcaggtgacgctgctgctcgactacctgccggaggcctgctggcgcttc
gacggcttccgtcacggctacgactacgcgctgtcgcgctgggacagcggctacagcgag
tgggacgaattggccgaatggctgctgcgccaggcgctgtggcgcggcgatggcgagcgc
gtggcgctgttcggccgcctcggcaacagcctcggcggcgccctcagcgcgctgctgctg
cagggcagctacggcgcggcgctggcgcatctcgacgcctggcgcgacgagcgcaaggcc
gagacccggcaacgcaagctcgacctgccggccgaactgcacgcgctctactgcctggcc
ctgctcggtgccgccgatccggcgcgccaagccgagctgaagcaggcgatccagcacggc
atcaagcacaacctcggccagagctacggcctgctgcagcacctggtggcgctgcaggaa
ggcgtggcggtgccggcctacctcggcctgcccgagcagatccacctggccgggctggac
gggctgatgctggcgctggcgctctactggctcgacgcccgccaggccacctcaacggcg
tggcaagccacgctgcacgccttccgcgagcgcatgcagcaggaaggctaccagcgcgtg
gtcgaggaactggaggcgctgctggaacggcaattcggcgagccccgcagcacgccggac
tggcacagccggcacggtgcgcgtccgctgctcgagctctaccagcgccgcgaggcctgg
cagcacgcgctcaccgcgctctcctcgctggcccccggcaaggccgccgaggcgcgccag
gcggcgccgaatccgacccggctcgcctggttcgtcagcgccggccgccacggcgtgctg
ctcgaaccgcgcgagcagaagcttggcgccaaggggcagtggagcaagggccgcgcggtg
gcgctcaagcgcctgctggacgaggccgacagcgccgactacctgctggagcaggaccgc
aacgttatgcgccacatccagcgcagttacgacggctactacggtggctccagctacgag
ctcgacggcgaaaaggcgctgccggcgctggtcggtcatccggcgctgttctgggccgac
gcccccgacgtgcgcatcgacgtcgccgccggccaggtggcgctgcagctcaaggaaagc
ggcgcccacatccagctcaagctgacgccggcgcgggtcggcgccgacagcgaggtggtg
tgggaaaaggacacgccgacgcggctggtggtctacccggtgagcaaggaaatccgccag
atcgccgccatcgtcggcaaggaactgaccgtgccgctggcggccaaggcgcagctgatg
gaggccatcaccagcatcgcgcccttggtgccgatccactccgacctgcccgagctggcg
gcgcacatcgacaccgtgccggccgacgcccggctctacgcccacctcctgccgctcgag
cagggcctgcgcctgcagctgctgatgcgcccgctgccgggcggcgcctggtgcaagccc
ggccaggggctggaaaacctggtgggcgaggtggacggcaaggcgttgcagacgcggcgc
gatctgaagcaggaaaagcaggcgctgcaggcggtgctggacgcctgcccggcgctcgcc
caggccgacggcgacggccaggaatggcagctcgccgagccgcaggcggcgctggaagtg
ctgtccgaactgcaggcggtcgacccggccacgctggaatgcgtctggcccgagggcgag
cgcatgcgcatcaaggcgcggcgcggcctggcgcagatgaagttcggcctgcaaaagcag
ggcgactggttcgtgctgtccggcgatctcgaactcgacgacggccgcgtgctgcagctg
cgccagctgctggaactgttgcaggccaatcccgggcgcttcctcaagctgggcgagcag
gactggctggcgctcaccgacgccatgcgtcgccgcctcgacgagctggcgctggtggcc
gaccacgtcggcaaggacggcgccatccgcctctccgcgctgaccgcgccgctgctggcc
gagctggaacaggaagccggccagttcgaggccgacgccgcctggcgcgagcagctcgcc
gcgttggccagcctcggcgactaccagcccacgccgccttccacgctgcaggccgagctg
cgcgactaccagctggaaggctacgcctggctggcgcgtctggcgcgctggggcgtgggc
gcctgccttgccgacgacatggggctcggcaagacggtgcagaccctggcgctgctgctg
gaacgcgccccggccgggccgcagctggtggtggcgccgacctcggtggcgctcaactgg
ttggccgaagccgcgcgcttcgcgccgaccctgaaggtgcgttcctaccagcagcagcgc
gcgctcgacacgctggcgccgttcgacctggtggtggtgagctacggcctgttgcagcag
gatgccgacgccttcgccgcggtgccgtggaccagcgtggtgctggacgaggcgcaggcg
atcaagaacgccggcaccaagcgcgcccaggcggtgcttggcctgcaggccggcttcaag
ctcgccgccagcggcacgccggtggaaaaccacctgggcgagctgtggagcctgttccgt
ttcctcaaccccggcctgttgggcagccaggaacgcttcaaccagcgcttcgccgtcccg
gtcgagcgcggcgacaagaacgcgcgcaaggcgctcaagacgctgatccagcccttcatc
ctgcgccgcaccaagagccaggtgctggacgagctgccgccgcgcaccgagatcaccttc
aaggtggcgctgtccggcgacgagctgcatctctacgaagcgctgcgccagcaggcggtg
gacaagctcgacgcgctgggcgaggaggacaacaagccgctcaaggtgctggccgaaatc
acccggctgcgccgcttctgctgccacccgcgcctggcgctgccggacagcgagctcgcc
ggcagcaagctcaaggcgttcgccgagattgccgacgagctgctcgacaaccgtcacaag
gcgctggtgttcagccagttcgtcgatcacctcgccatcgtgcgcgcctggctcgacgag
cgcggcatcgcctaccagtacctcgacggctccaccccggcgcgggagcgcaaggcgcgc
gtcgacgccttccaggccggccagggcgacctgttcctgatcagcctcaaggccggcggc
accggcctcaacctcaccgccgccgactacgtcatccacctcgacccgtggtggaacccg
gcggtggaagaccaggcctcggaccgcgcccaccgcatgggccagcagcgcccggtcacc
gtctaccggctggtggccgagcacaccatcgaggaacagatcgtggcgctgcacgccgcc
aagcgcgacctggccgacagcctgctggaaggcggcgaattgagcgccaagctcgacgcc
ggcgcgctgctgcaactgctcaaggggggctga
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