Pseudonocardia sp. AL041005-10: WY02_02355
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Entry
WY02_02355 CDS
T04051
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
psea
Pseudonocardia sp. AL041005-10
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psea03019
]
WY02_02355
Enzymes [BR:
psea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
WY02_02355
Messenger RNA biogenesis [BR:
psea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
WY02_02355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
nSTAND3
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALE77488
LinkDB
All DBs
Position
complement(639201..642107)
Genome browser
AA seq
968 aa
AA seq
DB search
MNGSAADPAAAYAAAKARAAYPRLAEFTGLMPFDLDPFQREACEALEDGHGVLLCAPTGA
GKTVAGEFAVHLALSEGRKCFYTTPIKALSNQKYADLVARYGADAVGLLTGDTAVNGDAQ
VVVMTTEVLRNMIYADSDKAANRRLDHLGYVVMDEIHYLADRFRGAVWEEVILQLPEHVA
VVGLSATVSNAEEFGDWLVEVRGDTRVVVDEHRPVPLWQHMMVGNRLFDMFGERSTPGGP
GEVVVDPELVRYTREMARRDFTTSRGSDRAGDRGPRGRGGPQRGRTRGGKTDSTAVVGRG
PRGGGPSRGGFRPPSRVQVIDRLDREGLLPAITFVFSRAGCDAAVGQCVRAGVRLTVPEE
VDEIRRIVEKHTGDLPQADLGVLGYWEWREALERGIAAHHAGLLPAFKETVEELFVAGLV
RCVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHAV
VLWAPGMDPEQVGGLASTRTYPLRSSFRPVYNMSVNLVGRLGTDAARELLERSFGQFQAD
RSVVGLARRIDRNAEALDGYREAMSCHLGDFAEYADLRRRIADREKSLRRQNTVAARDEA
SESLRELRPGDVIAVPSGKRAGIAVVLDPGIGAVSAAGRDAEARPLVCTEDRWAGRLSAA
DFPDAVEVLGRIKLPKRVEHRSPQVRRDLASSLRASRLGEGRALGRRRRPGVQDDPELST
LRRALRAHPCHGCDDREAHARWAERHARLERETETLRQKVRATTHSLARAFDRIRALLAE
RGYLVPAGEAEPGEEEITEHGRVLARLWGESDLLAAECLRHGAWDGLEPDELAAVVSALV
YESRRDDAPMPRLPTGPVSDALERTVRLWEELDADQRRHKAERTRAPDLAFAWPMHRWAR
GESLAQVLEAAERNGHELSAGDFVRWTRQVLDLLDQIAGVAGRSSAVGKAAHRASGAVRR
GVVAAGMQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggttccgccgccgacccggccgccgcgtacgcggcggcgaaggcccgcgccgcc
tatccgcggctggccgagttcaccggtctgatgcccttcgacctggacccgttccagcgc
gaggcgtgcgaggccctggaggacggccacggcgtcctgctctgtgcgcccaccggcgcc
ggcaagaccgtcgcgggtgagttcgccgtgcacctggccctgtccgagggccgcaagtgc
ttctacaccacgccgatcaaggcgctgtccaaccagaagtacgccgacctggtcgcccgc
tacggcgcggacgcggtcggcctgctcaccggtgacaccgcggtcaacggtgacgcccag
gtggtcgtgatgaccaccgaggtgctccgcaacatgatctacgccgactccgacaaggcg
gcgaaccgtcggctggaccacctcggctacgtggtgatggacgagatccactacctggcc
gaccggttccgcggcgcggtctgggaggaggtcatcctccagctgcccgagcacgtcgcg
gtcgtcgggctctcggccacggtcagcaacgccgaggagttcggcgactggctggtggag
gtccgcggcgacacccgcgtggtggtcgacgagcaccgcccggtgccgctgtggcagcac
atgatggtcgggaaccggttgttcgacatgttcggtgagcggagcacccccggcgggccc
ggtgaggtcgtcgtcgacccggagctggtccgctacacccgcgagatggcgcggcgggac
ttcaccacctcacgcggctcggaccgggcgggtgaccgcgggccgcgcggccggggtggt
ccgcagcgcggccgcacccggggcgggaagaccgactccacggccgtcgtcgggcggggg
ccgcgcgggggcgggccgtcgcgcggcgggttccggccgccgtcgcgggtgcaggtgatc
gaccggctcgaccgcgaggggctgctgcccgcgatcacgttcgtcttctcccgcgccggt
tgcgacgccgcggtcggccagtgcgtgcgggccggggtgcgcctgaccgtgcccgaggag
gtcgacgagatccgccggatcgtcgagaagcacaccggcgacctgccgcaggccgacctc
ggcgtgctcgggtactgggagtggcgcgaggctctcgaacggggcatcgccgcccaccac
gccgggctgctgccggcgttcaaggagaccgtcgaggagctgttcgtcgccggcctggtg
cgctgcgtgttcgccaccgagaccctggcgctgggcatcaacatgcccgcccgcaccgtc
gtgctggagcggctggtcaagtacaacggcgaggcccacgtcgacctcacccccggcgag
tacacccagctcaccgggcgtgccgggcgacgcgggatcgacgtcgagggccacgccgtc
gtgctgtgggcacccggcatggacccggagcaggtcggcgggctggcctccacccgcacc
tacccgctgcgcagctcgttccggccggtctacaacatgtcggtcaacctggtcgggcgc
ctgggcaccgatgccgcccgcgagctgctggaacgctccttcgggcagttccaggcggac
cggtcggtggtcgggctggcccggcggatcgaccgcaacgccgaggccctggacgggtac
cgggaggcgatgagctgccacctcggcgacttcgccgagtacgccgacctgcgcaggcgc
atcgccgaccgggagaagtcgctgcgccgccagaacaccgtcgccgcccgcgacgaggcc
tcggagtcgctgcgcgagctgcgccccggcgacgtgatcgcggtgccctcgggcaagcgc
gccgggatcgccgtggtgctcgacccggggatcggggcggtgtcggccgcgggccgcgac
gccgaggcccggccgctggtgtgcacggaggaccgctgggcgggacggttgtcggcggcg
gacttcccggacgcggtggaggtgctgggccggatcaagctgccgaagcgggtcgagcac
cgctccccgcaggtccgccgggacctggcctcctcgctgcgtgcctcccggctgggcgag
gggcgcgccctcgggcgtcgtcgccggcccggggtgcaggacgacccggagctgtcgaca
ctgcgccgggccctgcgcgcgcacccctgccacggctgcgacgaccgcgaggcgcacgcc
cgctgggcggagcggcacgcgaggctggagcgggagaccgagacgctgcggcagaaggtg
cgggccaccacgcactcgctggcccgggccttcgaccggatccgggcgctgctcgccgag
cgcggctacctcgtcccggcgggggaggccgagcccggcgaggaggagatcaccgagcac
ggccgggtcctcgcccggctgtggggcgagtcggacctgctggccgccgagtgcctgcgg
cacggcgcgtgggacggcctcgagcccgacgagctggccgcggtggtctcggcgctggtc
tacgagtcccgccgcgacgacgcaccgatgccgcggctgcccaccggcccggtgtccgac
gcgctggagcggaccgtgcggctgtgggaggagctcgacgccgaccagcgccggcacaag
gccgaacgcacccgcgcacctgacctggccttcgcctggccgatgcaccggtgggcgcgc
ggcgagtccctggcacaggtgctggaggccgccgaacggaacgggcacgagctgtccgcg
ggcgacttcgtacgctggacccggcaggtcctcgacctgctcgaccagatcgccggggtc
gccgggcggtcgagcgcggtcgggaaggcggcccaccgggcctccggtgcggtccggcgc
ggcgtggtcgcggccggtatgcagtag
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