Pseudonocardia sp. AL041005-10: WY02_05160
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Entry
WY02_05160 CDS
T04051
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WY02_05160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_05160
Enzymes [BR:
psea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WY02_05160
DNA repair and recombination proteins [BR:
psea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WY02_05160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
AAA_22
SH3_13
Helicase_RecD
UvrD-helicase
PhoH
AAA_16
TraI_hel_assoc_N
AAA_28
nSTAND3
T2SSE
SLFN-g3_helicase
Zeta_toxin
CbiA
AAA
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
ALE77926
UniProt:
A0A0M4QWK9
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All DBs
Position
1223330..1225243
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AA seq
637 aa
AA seq
DB search
MLAAFNEAEILAPGDVHVARRLAALGGRGDPTAADDPAAAEPEPVVLAAALAVRAIRNGS
VCVDLASAAATTAGEGEVAVDMSGLPWPEPATWRAACADSPLVAVGEDGPAGRPLRLLGN
LLYLERYWQEEELVRREFTARAGPVATVDPDRLCAALDRLLGDPGAERQRLAAAVAALRP
VAVIAGGPGTGKTTTVAALLAVLHDLHRATAPPGAPGLRVALAAPTGKAAARLTQSVAEA
HGRLPETDRAAVAGATASTLHRLLGSRGTSGRFRHHRGNRLPHDVVVVDETSMVSLTMMA
RLLEAVRPDARLVLVGDPDQLASVEAGAVLGDLAAAGGRAEPALQDALSACGAFRVDRPV
PASGAAGTPAPAEPGPPVVVRNGVVRLERNWRFGGTIADFASAVQGDDPDTAVALLRRGA
ADLSFVDGDAAELEPRRLDAFRQDVTRAAVDVIGAAEAGDAEQALRVLDDHRVLCAHRRG
PHGVTRWTAEIERWIETERPGFAAEAPWYPGRPLLVTTNDYDLGLFNGDTGVVVRAASGR
RAVFARDNAPVAFEPARLGGVGTVHAMTVHRSQGSQFKRITVVLPPADSPLMTRELLYTA
VTRAKESVRIIGTEEAVRAAIGRPAGRASGLQQRLGT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccgcgttcaacgaggccgagatcctcgcgccgggcgatgtgcacgtcgcccgg
cggctcgccgccctcggcgggcgcggcgacccgaccgccgccgacgacccggccgccgcc
gagcccgaaccggtggtgctcgccgccgcgctggccgtgcgcgcgatccgcaacgggtcg
gtctgcgtggacctggcgagcgccgcggccacgaccgcgggcgagggcgaggtcgccgtc
gacatgtccgggctgccctggccggagccggcgacgtggcgcgcggcctgcgcggacagc
ccgctggtcgccgtcggcgaggacggtcccgccgggcggccgctgcgcctgctcgggaac
ctgctctacctggagcgctactggcaggaggaggagctggtccgccgcgagttcaccgcg
cgcgccgggccggtcgcgaccgtcgaccccgaccggctgtgcgcggcgctggaccggctg
ctcggcgaccccggcgccgaacgtcagcgcctcgccgccgcggtcgccgcgctgcggccg
gtcgccgtgatcgccggtggccccggtacgggcaagacgacgacggtcgcggccctgctc
gccgtcctgcacgacctgcaccgcgcgaccgccccgcccggggcgccgggtctgcgggtg
gcgctcgccgcgccgaccgggaaggccgcggcccggctgacccagtccgtcgccgaggcc
cacgggcggctgccggagaccgaccgggccgccgtcgcgggggcgacggcgtcgacgctg
caccggctgctgggctcacggggcacctcgggccggttccgccaccaccggggcaaccgg
ctgccgcacgacgtcgtggtcgtcgacgagacgtcgatggtgtcgctgacgatgatggcg
cggctgctggaggccgtccggccggacgcccggctggtgctggtcggggacccggaccag
ctcgcgtcggtggaggccggtgccgtgctcggtgacctcgccgccgcgggcggccgggcc
gagcccgccctgcaggacgcgctgagcgcctgcggggcgttccgcgtggaccggcccgtg
ccggcctccggcgccgcgggcacccccgcgcccgccgagccgggcccgcccgtcgtggtg
cgcaacggggtggtgcggctggagcgcaactggcgcttcggcggcacgatcgcggacttc
gcgtcggccgtgcagggcgacgaccccgacaccgctgtcgcgctgctgcgccgcggcgct
gccgacctgtccttcgtcgacggcgacgcggccgagctcgagccgcgccgactggacgcg
ttccgccaggacgtgacccgggccgcggtggacgtgatcggggccgccgaggccggggac
gccgagcaggcgttgcgggtgctcgacgaccatcgcgtcctctgcgcgcaccgccgcggc
ccgcacggggtgacccggtggaccgcggagatcgagcggtggatcgagaccgagcgtccc
ggcttcgccgccgaggccccctggtacccgggccgcccgctgctggtcaccacgaacgac
tacgacctgggcctgttcaacggtgacaccggcgtcgtggtccgggccgcgtcgggacgc
cgcgcggtgttcgcccgggacaacgccccggtcgcgttcgaaccggcacgcctcggcggc
gtcggcaccgtccacgcgatgacggtgcaccgtagccagggcagccagttcaagcggatc
accgtggtgctgccgcccgcggactcgccgctgatgacccgcgagctgctctacaccgcc
gtcacccgggccaaggagtccgtgcggatcatcggcaccgaggaggcggtacgcgccgcg
atcggacgcccggccggacgcgcgagcggcctgcagcagcggctcgggacctga
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