Pseudonocardia sp. AL041005-10: WY02_13855
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Entry
WY02_13855 CDS
T04051
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
WY02_13855
09124 Replication and repair
03420 Nucleotide excision repair
WY02_13855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psea03021
]
WY02_13855
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_13855
Enzymes [BR:
psea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WY02_13855
Transcription machinery [BR:
psea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
WY02_13855
DNA repair and recombination proteins [BR:
psea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
WY02_13855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
ALE79336
UniProt:
A0A0M4Q7E8
LinkDB
All DBs
Position
complement(3041146..3042807)
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AA seq
553 aa
AA seq
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MTDGPLIVQSDKTLLLEVDHPDSAAARAAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRWARYPVPQPLLVDVVDTMGRYGRLQLSNHPAHGLVLTALDRAVLEEIL
RQKKISPMLGARLDDDTVVVHPSERGHLKQALLKVGWPAEDLAGYVDGEAHPIELEQDGW
TLRDYQQQAVDGFWEGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVSGRQWKRE
LIARTSLTEEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYKHLELFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWRDIEAQGWIAP
AECIEVRVTLTDAERMSYATADSEERYRTASTANTKLNVVQAILDRHKGEQTLVIGAYLE
QLDALGEKLGAPVIQGSTRNKEREKLFDAFRRGEIDTLVVSKVANFSIDLPEATIAVQVS
GTFGSRQEEAQRLGRLLRPKNDGRQAHFYSVVSRDTVDTDYAAHRQRFLAEQGYAYRIVD
ADDLLGPALPDAG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggccccctgatcgtccagtccgacaagacgctgctgctcgaggtggaccac
cccgactccgcggcggcccgtgcggccatcgcgcccttcgccgagctggagcgggcaccc
gagcacgtccacacctaccgggtcaccccgctggccctctggaacgcgcgcgcggccggg
cacgacgccgagcaggtcgtcgacgcgctggtccgctgggcccggtacccggtcccgcag
ccgctcctggtcgacgtcgtcgacacgatggggcgctacggtcggctgcagctgtccaac
caccccgcgcacggcctcgtcctcaccgcgctggaccgcgccgtgctggaggagatcctc
cggcagaagaagatcagcccgatgctgggcgcgcggctcgacgacgacaccgtcgtcgtg
cacccgtccgagcgcgggcacctcaagcaggcgctgctcaaggtcggctggcccgccgag
gacctcgccgggtacgtcgacggcgaggcccaccccatcgagctggagcaggacggctgg
acgctgcgggactaccagcagcaggcggtcgacgggttctgggagggcggctcgggcgtg
gtcgtgctgccctgcggcgccggcaagacgctggtcggtgccgccgcgatggccaaggcg
ggcgcgacgaccctgatcctggtcaccaacaccgtctccgggcggcagtggaagcgcgag
ctgatcgcgcggacgtcgctgaccgaggaggagatcggtgagtactcgggcgagaagaag
gagatccgcccggtcaccatcgccacgtaccaggtcgtcacccgcaagaccaagggcgag
tacaagcacctggagctgttcgactcccgggactggggcctggtcgtctacgacgaggtg
cacctcctcccggcgccggtcttccggatgacggcggacctgcagtcccgccgcaggctc
ggcctcaccgcgaccctggtccgcgaggacggccgcgagggcgacgtgttctccctgatc
ggcccgaagcgctacgacgccccgtggcgcgacatcgaggcgcagggctggatcgcgccc
gccgagtgcatcgaggtgcgggtgacgctgaccgacgccgagcgcatgtcctacgcgacg
gcggactccgaggagcgctaccggacggcgtcgacggcgaacaccaagctcaacgtcgtg
caggcgatcctggaccggcacaagggcgagcagacgctggtcatcggggcctacctcgag
cagctcgacgcgctgggggagaagctcggtgccccggtgatccagggctcgacccgcaac
aaggagcgggagaagctgttcgacgcgttccgccgcggcgagatcgacaccctcgtggtc
tccaaggtcgcgaacttctccatcgacctgcccgaggcgacgatcgcggtgcaggtcagc
ggcacgttcggatcccggcaggaggaggcccagcggctcgggcgcctgctgcgcccgaag
aacgacggccgccaggcgcacttctactcggtggtgtcccgcgacaccgtggacaccgac
tacgccgcgcaccggcagcgcttcctcgccgagcagggttacgcctaccggatcgtcgac
gccgacgacctcctcggcccggccctgcccgacgcaggctga
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