Pseudonocardia sp. AL041005-10: WY02_21005
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Entry
WY02_21005 CDS
T04051
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WY02_21005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_21005
Enzymes [BR:
psea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
WY02_21005
DNA repair and recombination proteins [BR:
psea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
WY02_21005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
ALE80479
LinkDB
All DBs
Position
complement(4459129..4460370)
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AA seq
413 aa
AA seq
DB search
MSATTSEEDPWPVRTVARKIAEWVDRLGAVWVEGQLAQVNARSGTAFLTLRDPAADISLQ
LTAPSSLVRDAGGAVTEGSRVIVHGKPSFYLGRGTLSLRVDRIRAVGLGELLARIERLRR
LLAAEGLFDPALKRRPPLLPHTIGLVTGRDSAAEHDVVRNATSRWPAVRFRIENVAVQGG
LAVEQVVGALRALDRDPDVEVIVLARGGGSVEDLLPFSDETLCRAVAACRTPVVSAIGHE
PDTPLVDHVADMRCSTPTEAGRSLVPDLAEETARISGLRDRARRALHGWVDREQHRLDDL
RRRPVLADPLRMVTSREGEIADARTAAHRAVLRRLDRSSSELEHLGARLAALGPTATLAR
GYAIVQLADRTDDDVPPLLRSVADAPAGTGLRIRVADGAVAATVTTTPDPETR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgccacgacctcggaggaggacccgtggccggtccgcacggtcgcccgcaagatc
gccgagtgggtcgaccggctcggcgcggtgtgggtcgagggccagctcgcccaggtcaac
gcccgctccgggaccgcgttcctgaccctgcgtgacccggccgccgacatctccctgcag
ctgacggcgccgtcgtcgctggtgcgcgacgccggcggcgccgtgaccgagggcagccgg
gtgatcgtgcacggcaagccgtcgttctacctggggcgcggcacgctgtcgctgcgcgtc
gaccggatccgcgcggtcgggctcggcgagctgctggcccgcatcgagcggctgcgcagg
ctgctcgccgccgaggggctgttcgacccggccctcaagcggcgcccgccgctgctcccc
cacaccatcggcctggtcaccgggcgcgactcggcggccgagcacgacgtcgtccgcaac
gcgacctcgcgctggcccgcggtgcgcttccggatcgagaacgtcgcggtgcagggcggg
ctcgccgtcgagcaggtcgtcggcgcgctgcgggccctcgaccgggacccggacgtcgag
gtcatcgtgctcgcccgcggcggcggcagcgtcgaggacctgctgcccttctccgacgag
acgctgtgccgcgccgtcgccgcctgccggaccccggtcgtgtcggccatcgggcacgag
ccggacaccccgctggtcgaccacgtcgccgacatgcgctgttccacccccaccgaggcc
ggacgcagcctggtgcccgacctggccgaggagaccgcgcggatctccgggctgcgcgac
cgggcccgccgcgcgctgcacggctgggtcgaccgggagcagcaccgcctcgacgacctg
cgacgacggccggtgctggccgacccgctgcgcatggtcacctcgcgggagggcgagatc
gccgacgcccgcaccgccgcccaccgcgcggtgctgcgccggctggaccggtcgtcgtcg
gagctggagcacctgggtgcccggctcgccgcgctcggcccgaccgcgaccctggcccgc
ggctacgcgatcgtgcagctcgccgaccgcaccgacgacgacgtgcccccgctgctgcgg
tcggtcgccgacgcacccgccggcaccggcctgcggatccgggtcgccgacggcgccgtc
gccgccaccgtgaccaccacccccgacccggagacccgatga
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