Pseudonocardia sp. AL041005-10: WY02_21705
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Entry
WY02_21705 CDS
T04051
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea03420
Nucleotide excision repair
psea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WY02_21705
03430 Mismatch repair
WY02_21705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_21705
Enzymes [BR:
psea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WY02_21705
DNA repair and recombination proteins [BR:
psea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WY02_21705
MMR (mismatch excision repair)
Other MMR factors
WY02_21705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALE80592
UniProt:
A0A0M4PV59
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All DBs
Position
4603677..4605773
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AA seq
698 aa
AA seq
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MPDPAAPIGADGLDPEQRAAVHAPRGPVCVLAGAGTGKTRTITRRIAHLVTSGHVAATQV
LAVTFTARAAGELRTRLRALDASGVQARTFHAAALRQLRYFWPQMVGGSPWPLLDGKLRL
VGQAAARARAGTDSDALRDLASEIEWAKSTLVAPSDYAGEVARRRRDTPGPAEQVAAVYA
AYEELKNASEQLDFDDLLLHTAIALEEHGGVAEEFRSRYRCFVVDEYQDVTPLQQRLLDA
WLGDRDDLTVVGDANQTIYTFAGASPRYLLEFPRRFPDAAVVRLQRDYRSTPQIVGCANQ
LIGAARNRPAGSRLQLIGQLPPGPDPDFSEHDDEAGEAAAVAGRILTLINDGTEPSEIAV
LFRINAQSEAFEQALSDAGVPYQIRGGERFFNRPEIRRAMLALRTAAPDQRPGTDLVDVT
RAVLTARAGLTDEPPKGATLRAQWESLLALVGVAEELAAVEPQADLRRLCGELETRADHA
QAPVVNGVTLASLHAAKGLEWDAVFLVGLADGTLPIGHAGDDEAAVEEERRLFYVGVTRA
RRVLSMSWSLSRASGRGPKRRRSRFLYGLIPDSHPASRVAGERRPGGARPKCRVCGTPLF
GATATKLLRCDDCPSDVDLELLDRLKQWRSAAAKAQDVPGFVVLTDATLTAIAEQRPAGP
SALVGIPGIGAAKLDRYGDDVLRVLAEHAAEGSRPPLR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgccggacccggcggccccgatcggcgcggacggtctggaccccgagcagcgggccgcg
gtgcacgcgccgcgcggcccggtctgcgtcctcgcgggggcgggcaccggaaagacccgc
acgatcacccggcggatcgcccaccttgtgacctcgggccacgtcgcggccacccaggtc
ctcgccgtcaccttcaccgcccgcgccgcgggggagctgcgcacccggctgcgcgccctc
gacgcctccggggtgcaggcccgcaccttccacgccgcggcactgcgtcagctgcgctac
ttctggccgcagatggtcggcggcagcccgtggccgctgctcgacggcaagctgcggctc
gtcggccaggcggccgcccgcgcccgggccggcaccgactccgacgcactgcgcgacctc
gcctccgagatcgagtgggcgaagtcgaccctggtcgccccgtcggactacgcgggcgag
gtcgcccgccgtcgccgcgacacccccggcccggccgagcaggtcgccgccgtctacgcc
gcgtacgaggagctgaagaacgcgagcgagcagctcgacttcgacgacctgctcctgcac
accgcgatcgcgctggaggagcacggcggcgtcgccgaggagttccggtcccgttaccgg
tgcttcgtcgtcgacgagtaccaggacgtcaccccgctgcagcagcgcctgctcgacgcc
tggctcggcgaccgcgacgacctcaccgtcgtcggcgacgccaaccagacgatctacacc
ttcgccggcgcctccccccggtacctgctggagttcccacgccgcttccccgacgccgcg
gtcgtgcgcctgcagcgcgactaccgctccaccccgcagatcgtcggctgcgcgaaccag
ttgatcggcgccgcccgcaaccggcccgccggatcccggctgcagctcatcgggcagctc
ccgcccggccccgacccggacttctccgagcacgacgacgaggccggggaggccgccgcc
gtcgcgggccggatcctgaccctgatcaacgacggcaccgagccgtcggagatcgcggtg
ctgttccggatcaacgcccagtccgaggcgttcgagcaggccctgtccgacgccggcgtg
ccctaccagatccgcggcggcgagcggttcttcaaccggcccgagatccgccgggcgatg
ctcgcgctgcggaccgcggcgccggaccagcggccgggcaccgatctcgtcgacgtcacc
cgcgcggtgctcaccgcccgcgccgggctgaccgacgagccgccgaagggcgcgacgctg
cgcgcgcagtgggagtcgctgctggcgctggtcggcgtcgccgaggagctggccgcggtc
gagccgcaggccgacctgcgccggttgtgcggggagctggagacccgcgccgaccacgcg
caggcgcccgtcgtcaacggcgtcacgctggcgtcgctgcacgccgcgaagggcctggag
tgggacgcggtgttcctcgtcggactcgccgacggcacccttcccatcggccacgccggc
gacgacgaggctgccgtcgaggaggaacgccggctgttctacgtcggcgtcacccgcgcc
cggcgggtgctgtccatgtcgtggtcgctgtcccgggcctccgggcgcgggccgaagcga
cgccgctcgcggttcctgtacggactgatcccggactcgcacccggcgtcccgggtcgcc
ggcgagcgccggcccggcggagcccggcccaagtgccgcgtctgcgggaccccgctgttc
ggggccaccgccaccaagctcctgcgctgcgacgactgcccgtccgatgtggacctggag
ctgctggaccggctgaagcagtggcggtcggcggcggcgaaggcgcaggacgtgcccggc
ttcgtcgtactcaccgacgccacactcaccgcgatcgcggagcaacggcccgccggaccg
tcggccctggtgggcatcccggggatcggcgcggccaagctggaccgctacggcgacgac
gtgctgcgggtgcttgccgagcacgcggcggagggctcacgaccccctcttcggtag
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