Pseudonocardia sp. AL041005-10: WY02_23560
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Entry
WY02_23560 CDS
T04051
Name
(GenBank) hypothetical protein
KO
K06236
collagen type I alpha
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
WY02_23560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
psea00536
]
WY02_23560
Glycosaminoglycan binding proteins [BR:
psea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
WY02_23560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ALE80874
UniProt:
A0A0M5LW85
LinkDB
All DBs
Position
4997310..5001395
Genome browser
AA seq
1361 aa
AA seq
DB search
MTFDLQGRAAGATTAELRTAVALRWQRPLLTAELAEQACARAVADGDDLRWLQAAGWLLD
GHAAGGDARDVATAVVAGVTGHATRGDSTVPVPLRSPGAEVLTRPEGARLRVELAGVAQA
DGELEAARALVVGLPDDAPGEDPGLLRLDRLAVEVRCALAGASAAELERLRSDVDACGSG
FGGEPAAYADLVVGSVHRARREHDAAVDRALRGLAQLGWTPERPGSRPLSTHLAAALLSQ
WITALLDSGHVPPDAVAAAVAQRDAEDAGRQGVLLRLTLARVQAGRADHAARALVEAADG
AEQAGVPALVAACRTAQSELHEGSGRYREALETMRAAMEADQVDRDRGTRFRAAVAALLP
LAAVRTSTTERPTPFPRTGGSPAVPAAAGGIAAGAATGGPGAGDRDGAGRSTPETEFAAS
RSGSVESSSGADKRGGDDPPAGTPVEEREVGARTDRPAGTGDTGPDRGRPTDDRPADDLL
TGTASRNGRSDGAGAGDDRPAGPGDDGATGAGAPNGRPANDLPTAGRFPVRWAPSESLLL
DPGTRNGAGTADPSPDDRTVGRSTGANRNGHRPGEAALAADASSATGTPGTTDTAGTPDG
ANAAGSADRASDDTTDAGGRRPAGIDPADPLGVSGLLADGTAPTAPRDPSWTGPSWTLDA
AGGSPLADALLAEWRAPEPPTATHRNGSYGPADAVPRNGARHDAAHRPGDGHGAGPAAGP
GPVDGLRNGAPAPEPALAAEWAATEPPVAAEQAADEPTVAAAEQAADESTVVAERAAGES
TVVAGRAAGEPAVVAGRAADEPNPAEADPRSDRASARAAAPVGDSGPAAAPTAPAAPTGP
PGTAERSIVLDLVDGDLETVTGTAAVGALHDVVTRARRLVPPSGTTRRDDDTVRVTLPDV
DHVTVLLWARSLATHLGGRVRRGGLPAGTSLRMQAVGPHGVEGDEIITELTGPDTPAPLP
ETPSARAGGHSGAAQTGDAGSGAGELSAAPEPVAGPALATPLDLSGERAARGGRRRAAGD
GTASLSAVGLTVRPGSGGRRRSDGAVRDPAARDRAVRHRAAHDSGARDRGPGLPAAPHLP
GRDQAHAEARGKVGSDPAGPARDEPSRVWGGSAPADPTPVPDPLDTRFALPPEPDRRLAE
AVRAHLDLPGPDGATSRFDGPARERSGLPVRWSGVDDGAGESALPRRRGRDATPPADDGD
GGASGLFDGGGTTSAGGHRASGGPDRGGVGAGTWTVRTATGPSVVRGAAAAVAPASGDAA
AGGDAAAGGDPAAGGDDEPSTGAVHTPTTDQRPAGNRPDAGGRAPDAGTATRRARSRRAV
PRTERCRRTPRRGRTAEPRGTSRRPPRMTTPRPRRGTARHR
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttcgacctgcaaggtcgggccgccggcgcgacgacggccgaactgcgcacggcg
gtggccctgcgctggcagcggcccctgctcactgcggaactggccgagcaggcgtgcgcg
cgagctgtcgcagacggtgacgatctgcgctggctgcaggccgcgggctggctgctcgac
ggccacgccgccggtggggacgcccgcgacgtcgccactgccgtcgtcgccggggtgacc
ggtcatgccacccggggtgacagcacggtccccgtgcccctccgctcgcccggtgccgag
gtcctcacccgccccgagggcgcccgtctgcgggtggaactggccggggtcgcccaggcc
gacggagagctcgaggcggctcgggcactcgtcgtcggcctgccggacgacgccccgggc
gaggacccggggctgctgcgcctcgaccggctcgcggtcgaggtgcgctgcgcactcgcc
ggcgcctccgccgccgagctcgagcggctgcgcagcgacgtcgacgcctgcggctccggc
ttcggtggcgaacccgcggcgtacgcggacctcgtcgtcgggtcggtgcaccgggcccgg
cgcgaacacgatgccgccgtggaccgcgcgttgcgcggtctggcccagctcggatggaca
ccggaacggcccgggtcccgcccgctgtcgacccacctcgccgcggcactgctcagccag
tggatcactgcgctgctcgactccgggcacgtcccgcccgacgcggtcgccgcggccgtc
gcgcagcgcgatgccgaggacgccggtcggcagggtgtgctgctgcggctcacgctggcc
cgggtgcaggcgggacgcgcggaccacgcggcccgcgccctggtcgaggccgccgacggc
gccgaacaggcgggcgtccccgcgctcgtcgcggcctgccgaaccgcccagtccgagctg
cacgagggctcgggccggtaccgcgaggccctcgagacgatgcgcgccgcgatggaggcc
gaccaggtcgaccgtgaccgcgggacgcgcttccgcgccgcggtggccgcgttgctgccg
ctcgccgccgtccgcaccagcaccaccgagcgacccaccccgttcccgcgcacgggcgga
tcgccggccgtaccggccgcggccgggggcatcgccgccggtgccgcgacgggcggaccc
ggtgccggcgaccgggacggcgccggtcgcagtacgccggagacagaattcgccgcgtcc
cgctccggcagcgtggagtcgtcctccggcgcggacaagcggggcggagacgacccgccc
gccgggacgcccgtcgaggaacgcgaggtcggcgcccggaccgaccgacccgccggaacc
ggcgacaccgggcccgaccgcggtcgcccgaccgacgatcggcccgcggacgacctgctg
accggcacggcgagcaggaacggtcgctcggacggagccggggccggggacgaccgtccg
gccgggcccggggacgacggcgccacgggcgccggggccccgaacggccgtccggcgaac
gacctccccacggccgggcgcttcccggtgcgctgggcgccgtcggagagcctgctcctg
gatcccggtaccaggaacggcgccggaaccgccgacccgtcgccggacgaccggaccgtg
ggccgatccaccggcgcgaaccggaacggtcaccgtcccggcgaggccgccctcgcggcg
gatgcgtcgtcggcgaccggtacgccgggcacgacggacaccgccggtacgccggacggg
gcgaacgccgcagggtcggccgaccgggcgtcggacgacacgacggacgccgggggtcga
cgacccgcgggcatcgaccccgccgacccgctgggcgtctccggcctcctcgcggacggc
acggcaccgacggcaccccgggacccctcgtggaccggcccgtcgtggaccctcgacgcg
gcaggcggttcgccgctcgccgacgccctcctggccgagtggcgtgcccccgagccgccc
acggccacgcaccggaacggatcctacggcccggccgacgccgtcccgcggaacggagca
cggcacgacgcggcccaccggcccggcgacggccacggggccggcccggcagccgggcca
ggtcccgtcgacggcctccggaacggggctcctgctccggagccggccctcgccgccgag
tgggctgcgactgagccgcccgtcgccgccgagcaggctgcggacgagccgaccgtcgcc
gccgccgagcaggctgcggacgagtcgaccgtcgtcgccgagcgggctgcgggcgagtcg
accgtcgtcgccgggcgggctgcgggcgagccggccgtggtcgccgggcgggctgccgac
gagccgaaccccgccgaggccgacccgaggtccgatcgggcgagcgcgcgcgccgcggcc
cctgtcggggacagcggcccggccgcggcaccgacggcccctgcggccccgacgggacca
cccggtacggcggagcggtcgatcgtcctcgacctcgtcgacggcgacctcgagaccgtc
accggtacggcggcggtgggggccctgcacgacgtggtcacccgggcccgccggctggtt
ccgccgtccggaaccacacgtcgcgacgacgacacggtgcgggtcaccctgcccgacgtc
gaccacgtcaccgtcctgctctgggcacgatcgctcgcgacgcacctcggcggccgcgtg
cgccggggcgggctgccggcggggacgtccctgcggatgcaggccgtcggaccgcacggt
gtcgagggtgacgagatcatcaccgagctgaccgggccggacacgccggcgcccctcccc
gagaccccctcggcccgggccggcgggcactccggcgccgcgcagaccggtgacgcggga
tccggtgccggtgagctgtcggccgccccggagccggtcgcggggccggcgctggcgacg
ccgctggacctgtccggcgagcgagcggcccgaggtgggcggcgacgggccgccggggac
gggacggcgtcgttgagcgccgtcggtctcaccgtccggcccgggagcggcgggcggcgg
cgctcagacggagccgtccgggacccggcggcccgcgaccgagccgtccggcaccgggcc
gcccacgactccggtgcccgcgatcgtggccccggactccccgccgcgccgcacctcccc
ggccgcgaccaggcccacgccgaggcccgcggcaaggtgggcagcgaccctgccgggccg
gcgcgggacgagccgtcgcgggtgtggggcggttccgccccggcggaccccacgccggtg
ccggacccgctggacacccggttcgcgctgcccccggaaccggaccggcgcctcgccgag
gcggtccgggcccacctcgacctccccgggccggatggcgccacctcccgcttcgacggc
ccggcccgggaacgttccgggctgccggtgcggtggtccggggtcgacgacggagcgggg
gagtcagcgctgccgcgtcgtcgtgggcgggacgccaccccaccggccgacgacggagac
ggcggggcctccggtctgttcgacgggggcgggaccacgtccgcaggcggccaccgcgcg
tccggcgggcccgaccgcggtggcgtgggcgcggggacctggacggtgcgtaccgcgacc
ggaccgtccgtggtgcggggcgcggcggccgccgtcgccccggcgagcggtgacgctgcc
gcgggcggcgacgctgccgcgggcggtgaccctgccgcgggcggcgacgacgaaccgtcg
accggcgccgtccacacaccgacgacggaccaacgacccgccgggaaccgaccggacgca
ggcgggcgggcgccggacgccggcaccgcgacccgacgggctcgctcccgccgagcggtc
ccgcggacggaacggtgccgtcggacaccgcgacgcgggaggacggccgagccacgaggg
acgagccgtcggcctccccgcatgacgacgccccggccgcgacgcgggacggcgcgtcac
cggtga
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