Pseudonocardia sp. AL041005-10: WY02_27310
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Entry
WY02_27310 CDS
T04051
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psea
Pseudonocardia sp. AL041005-10
Pathway
psea03030
DNA replication
psea03430
Mismatch repair
psea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WY02_27310
03430 Mismatch repair
WY02_27310
03440 Homologous recombination
WY02_27310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psea03032
]
WY02_27310
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_27310
Enzymes [BR:
psea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WY02_27310
DNA replication proteins [BR:
psea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WY02_27310
DNA repair and recombination proteins [BR:
psea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WY02_27310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALE81454
UniProt:
A0A0M4PWN1
LinkDB
All DBs
Position
5796765..5800313
Genome browser
AA seq
1182 aa
AA seq
DB search
MGSAGSGSRSFVHLHTHTEFSMLDGAARLDDLFSEAAKHEMPAIAMTDHGNVYGAFEFWR
KAKAHDVKPIIGMEGYLAPGSRHERKRTALGNGSENNPDLMYTHMTLLAENTEGMHNLFR
LSSLASLEGYYYKPRMDRELLEKYGKGLIATTGCPSGEVARLLQQHDFDAACQAASDYRD
IFGKDNFFLELMDHGIEIEKRVQEDLFRLKDKLDLPGLATNDLHYTYPDDTKAHEVLLCV
QTGKTLADPNRFKFDAQDFYLKSAAEMRQLWDPIHPEACDNTLLVAERCNIDFTTGQDLQ
PKAPVPEGETEESWLIKEVERGLHMRFPDGVTEKYRQQANYEVGVIIKMGYPGYFLVTAD
LIQHAKSVGIRCGPGRGSAAGSLVAYVLGITDLDPIRHKLIFERFLNPDRVSMPDIDMDF
DERRRGEMIRYVTEKYGEDRIAQIITYSTIKAKAAIKDSARVLFGQPGYSVADRISKAMP
PAVMGKDIPLSGIFDPSHKRYSEATEVRALYEADPQVKEIVDTARGLEGLKRQWGVHAAG
VIMSSTPLIDVIPIQRRESDGAIITQFDMGVCETIGLLKMDFLGLRNLTILDDALENIEL
NGKPAVDLDKVELDDRKTYELLSRGDTLGVFQLDGGPMRDLLRRMAPSEFEHISAVGALY
RPGPMGANAHNDYADRKNGRQEITPIHPELAEPLKDVLGETFGLIVYQEQVMSIAQVLAG
YTLGQADLLRRAMGKKKKEILDKEYAGFAQGMKDNGYSAAAVKTLWDILLPFSDYAFNRA
HSAAYGVVSYWTAYLKANYPAEYMAGVLTSVRDDKDKAAVYLAECRRMGITVLPPDVNDS
VRNFAPVGDDIRFGLGGIRNVGHNVVDAIVAARREKGNFVDFSDFLRKVDAVVCNKKVVE
SLIKAGAFDSLGHSRKGLLLVHADAIDAVMSTKKAASMGQFDLFGSLDGPGEGDDGGLGG
IFDVKVPDEEWDTKHKLAVEREMLGLYVSGHPLQGLEQALAAKSDTSIADIVEGSVAEGA
QVTVGGILANVNRRVNKNGEPWASAQIEDLAGGIEVLFFPRAYQVVGVDVAEDAIVLVKA
RVNKRDDRVSLIANDLAVPELATGEAGLPIRVSLRTDQCTPERVAKLKEVLTHHPGTSEV
HLTLVYGTKMTALRLDDSLKVMHTSALMGDLKALLGPGCLGG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgccggatccgggagtcgctccttcgtccatctgcacacgcacaccgagttc
tcgatgctggacggtgccgcccggctcgacgacctgttctccgaggccgccaagcacgag
atgccggccatcgcgatgaccgaccacggcaacgtctacggcgccttcgagttctggcgc
aaggcgaaggctcacgacgtcaagccgatcatcggcatggagggctacctcgcgcccggg
tcgcggcacgagcgcaagcgcaccgcgctgggcaacggcagcgagaacaaccccgacctc
atgtacacccacatgacgctgctcgcggagaacacggaggggatgcacaacctcttccgg
ctctcctcgctggccagcctcgagggctactactacaagccgcgtatggaccgcgagctg
ctggagaagtacggcaaaggcctgatcgcgacgaccggctgcccctccggggaggtcgcg
cgcctgctccagcagcacgacttcgacgccgcctgccaggccgcgagcgactaccgcgac
atcttcgggaaggacaacttcttcctggagctgatggaccacggcatcgagatcgagaag
agggtccaggaggacctgttccggctcaaggacaagctcgacctgcccggcctcgcgacg
aacgacctgcactacacctacccggacgacaccaaggcgcacgaggtgctcctgtgcgtc
cagaccggcaagaccctcgcggacccgaaccggttcaagttcgacgcgcaggacttctac
ctcaagtccgccgccgagatgcgccagctctgggacccgatccaccccgaggcctgcgac
aacacgctgctcgtcgccgagcgctgcaacatcgacttcaccaccggccaggacctccag
cccaaggcgcccgtccccgagggggagaccgaggagtcctggctgatcaaggaggtcgag
cggggactgcacatgcggttccccgacggcgtcaccgagaagtaccggcagcaggccaac
tacgaggtcggcgtcatcatcaagatgggctaccccggctacttcctggtgaccgcggac
ctcatccagcacgccaagtcggtcggcatccgctgcggccccggccgtggttcggcggcg
ggctcgctggtcgcctacgtcctgggcatcaccgacctcgacccgatccggcacaagctg
atcttcgagcggttcctgaacccggaccgtgtgtcgatgcccgacatcgacatggacttc
gacgagcggcggcgcggcgagatgatccgctacgtcacggagaagtacggcgaggaccgg
atcgcgcagatcatcacctactccacgatcaaggcgaaggccgcgatcaaggactcggcg
cgggtgttgttcggccagcccggctactccgtggccgaccgcatctccaaggccatgccg
cccgcggtgatgggcaaggacatcccgctgtcgggcatcttcgacccgtcgcacaagcgg
tactccgaggcgaccgaggtccgcgccctctacgaggcggacccgcaggtcaaggagatc
gtcgacaccgcgcggggcctcgagggactgaagcggcagtggggtgtgcacgccgcgggc
gtgatcatgtcctcgacgccgctgatcgacgtgatcccgatccagcgccgggagtccgac
ggcgcgatcatcacgcagttcgacatgggcgtctgcgagaccatcggtctgctgaagatg
gacttcctggggctgcgcaacctcaccatcctcgacgacgccctggagaacatcgagctc
aacggcaagcccgccgtcgacctggacaaggtcgagctcgacgaccgcaagacctacgag
ctgctctcccgcggggacaccctcggcgtgttccagctcgacggcggcccgatgcgcgac
ctgctgcgccgcatggcgcccagcgagttcgagcacatctccgcggtcggcgcgctgtac
cgcccgggcccgatgggtgcgaacgcgcacaacgactacgccgaccgcaagaacggccgg
caggagatcacgccgatccacccggagctggccgagccgctcaaggacgtcctcggcgag
accttcggcctgatcgtgtaccaggaacaggtcatgtccatcgcgcaggtgctggcgggc
tacacgctcggccaggcggacctgctccgccgcgcgatgggcaagaagaagaaggagatc
ctggacaaggagtacgccggcttcgcccagggcatgaaggacaacggctactccgcggcc
gcggtcaagacgctctgggacatcctgctcccgttctccgactacgccttcaaccgcgcc
cactccgccgcctacggcgtggtgtcgtactggacggcctacctcaaggcgaactacccg
gccgagtacatggccggcgtgctcacctcggtgcgcgacgacaaggacaaggccgcggtc
tacctggcggagtgccgccggatgggcatcacggtcctcccgcccgacgtgaacgactcg
gtgcgcaacttcgccccggtcggcgacgacatccgcttcggtctcggcggcatccgcaac
gtcgggcacaacgtcgtcgacgcgatcgtcgccgctcggcgggagaaggggaacttcgtc
gacttctccgacttcctgcgcaaggtcgacgcggtcgtctgcaacaagaaggtcgtcgag
tcgctgatcaaggcgggcgcgttcgactcgctcggccactcccgcaagggccttctgctc
gtgcacgccgacgccatcgacgcggtgatgagcaccaagaaggccgcctcgatgggccag
ttcgacctgttcggctcgctggacggcccgggcgagggcgacgacggcggtctcggtggc
atcttcgacgtgaaggtgcccgacgaggagtgggacaccaagcacaagctcgccgtcgag
cgggagatgctcggcctgtacgtgtccgggcacccgttgcagggcctcgagcaggcactc
gccgcgaagtccgacacctcgatcgccgacatcgtcgagggctcggtcgccgagggtgcg
caggtcaccgtcggcggcatcctcgccaacgtcaaccgccgggtgaacaagaacggcgag
ccgtgggcgtcggcgcagatcgaggacctcgccggcggtatcgaggtgctgttcttcccg
cgggcgtaccaggtggtcggcgtcgacgtcgccgaggacgcgatcgtgctggtcaaggca
cgggtcaacaagcgcgacgaccgcgtgtcgctgatcgcgaacgacctcgcggtgcccgag
ctggccaccggtgaggccgggctgccgatccgggtcagcctgcgcaccgaccagtgcacc
cccgagcgcgtcgcgaagctcaaggaggtgctgacccaccaccccggtacctccgaggtg
cacctgaccctggtctacggcaccaagatgacggccctgcggctggacgactcgctcaag
gtcatgcacacctcggcgctgatgggggacctgaaggccctgctcggccccggctgcctc
ggcggctga
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