Pseudonocardia sp. AL041005-10: WY02_28390
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Entry
WY02_28390 CDS
T04051
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psea
Pseudonocardia sp. AL041005-10
Brite
KEGG Orthology (KO) [BR:
psea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psea03032
]
WY02_28390
03400 DNA repair and recombination proteins [BR:
psea03400
]
WY02_28390
Enzymes [BR:
psea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WY02_28390
DNA replication proteins [BR:
psea03032
]
Prokaryotic type
DNA Topoisomerases
WY02_28390
DNA repair and recombination proteins [BR:
psea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WY02_28390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF6443
Motif
Other DBs
NCBI-ProteinID:
ALE81620
UniProt:
A0A0M5LSI5
LinkDB
All DBs
Position
complement(6026961..6027980)
Genome browser
AA seq
339 aa
AA seq
DB search
MRLTRAIPYRGGLTRRRRGRGFSYHDATGAAVAAPVRARIEGLVIPPAWRDVWISERERD
HIQAVGYDDAGRRQYVYHPRWHADRDTEKHDRVLELARRLPRFRERVQRALDGRGTGRDR
VLGGAMRILDLGVFRTGGEQYAEENGTFGLSTLRREHVRLRGGGCEFSYTAKGGIHRRVR
IRDDGLVRLVQALRRARPDGDRFLVHRDGRRWREIRSDDVNDHFRSLTDAAHTAKDLRTW
NATVVAAVAFAEHGSAGGAELSATALKRAEAAAMRQVARALGNTPAVARSSYVDPRVVRA
FEEGHTVAAGLRRIPRGADEHRSRVAVERAVLRLLERRS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactgaccagggcgatcccgtaccgcggcggtctcacccgtcgtcgtcgggggcgg
ggtttcagctaccacgacgcgaccggcgccgccgtcgccgcgccggtgcgggcccggatc
gaggggctggtgatcccgcccgcctggcgggacgtgtggatctccgagcgggaacgcgac
cacatccaggccgtcggctacgacgacgcgggccgccgccagtacgtctaccacccgcgc
tggcacgccgaccgcgacaccgagaagcacgaccgcgtgctggagctcgcccgcaggctg
ccccgtttccgtgagcgcgtgcagcgcgccctcgacggccgcgggaccggccgcgaccgg
gtgctcggcggggcgatgcgcatcctcgacctcggggtgttccgcaccggcggcgagcag
tacgccgaggagaacggcaccttcgggctgtcgacgctgcgccgcgagcacgtccggctg
cgcggcggcgggtgcgagttctcctacaccgccaagggcggcatccaccggcgcgtccgg
atccgcgacgacggcctggtccgcctggtccaggcgctgcgccgggcccgcccggacggc
gaccgcttcctcgtccaccgcgacgggcggcgctggcgcgagatccgctccgacgacgtc
aacgaccacttccggtcgctcaccgacgccgcgcacaccgcgaaggacctgcggacctgg
aacgccaccgtcgtcgccgcggtcgcgttcgccgagcacggctccgccggtggcgccgag
ctgtccgcgaccgcgctgaagcgggccgaggccgccgcgatgcgccaggtcgcccgggca
ctgggcaacaccccggccgtcgcccgcagcagctacgtcgacccgcgtgtggtgcgggcc
ttcgaggagggccacacggtcgcggccgggctgcgccgcatcccgcgcggcgccgacgag
caccgcagccgggtcgccgtcgaacgggcggtgctgcgcctgctcgaacgccgcagctga
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