KEGG   Pseudorhodobacter turbinis: EOK75_02520
Entry
EOK75_02520       CDS       T05954                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pseb  Pseudorhodobacter turbinis
Brite
KEGG Orthology (KO) [BR:pseb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pseb02048]
    EOK75_02520 (hsdR)
Enzymes [BR:pseb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     EOK75_02520 (hsdR)
Prokaryotic defense system [BR:pseb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   EOK75_02520 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD HSDR_N Helicase_C DUF4145 AAA_19 PhoH
Other DBs
NCBI-ProteinID: QCO56473
UniProt: A0A4P8EI61
LinkDB
Position
complement(545409..548723)
AA seq 1104 aa
MEIDRPLSVLASHAERYFVDDANTALIKTRQFAERMTYFVAENAGAMQEDGDTFADTLRK
IRRDDLLPSEILDVLHHLRIEGNAAVHGHSGERRLAFEAIKLCHRLGVWLRASVTNKPGL
TIPFIPPSLSADDTEDLRQQVEDLRQQLHKQSLAASEQAEFAQNAKSAALDAEQRAVLAE
EERAIYAELALEAENIGREKRPSGSAQTFIKAAFASAKDMDFDEADTRLLVDEQLRQAGW
EADSGELRYAAGTRPERNRNIAIAEWPTASGPADYALFVGLTLVGLIEAKRKRKNVMSAL
DVQATRYSHDIQPAESFKFAGGPWGEHKAPFIFASNGRSYYPALETQSGIWFRDTRVAKN
AARALEGWFTPEGLSERLEVDREAAEAKLADQPFNFGFELRPYQIAAIKAVEEGLAKERR
EMLVAMATGTGKTKLAIAMIYRLLEAKRFLRVCFIVDRSALGEQAESAFETTRMVGAKTF
AEIFGLRGLDDHSTDRDAKIDICTVQSLVKRVLEKEPRNRPPIDQYDLILIDECHRGYLL
DREMSAAETTFRDQNDYVSKYRRVVEYFDAVKIGLTATPALHTAEIFGEPIYRYSYREAV
VDGWLVDHDPPHLIKTALSKAGITLEAGDTIDILDPKTGEIDTATLPDQMDFRVEHFNRK
IRTPTFNKVVSEEIARRVDITSPDAGKTLVFAASDDHADEIVACLRQAYRDEGLDICDDM
IQKVTGSIDKPNKMILKYKNERDPRIAVTVDLLTTGIDVPAIKNLVFLRRVNSRILYDQM
IGRATRKCDEIGKDAFQIYDAVDLYPNLQAMTEMRPVVVNPTVTFETLFDGFENAEDSTH
QDEILDQITVKLSRKVRKMNDDIRQQYTAQAGETPEETLKRFRTTETPAVSIWTKERPGL
GAFFDFKGDRGAPPIIPIYTGQDEVVSVSRGYGDGVKPADFIDAFQEFIRENANRIDALN
LVLTRPRDLTRESLKDLRMALDARHFTESALRTAWRDKTNEDIAASIIGLIRQAALGDAL
VPYSTRVDAAIRKVLSSHDLDDVQQRWLSKIGDEMKSQVVIDRKAFDDPPFAQHGGYKRF
DKIFKGELDAILEEIRNNTWEPAA
NT seq 3315 nt   +upstreamnt  +downstreamnt
atggaaattgatcgtccgttatcggttctggcctcacatgccgaacggtactttgttgat
gacgccaatacagcgctgatcaagaccagacagtttgcagagcgaatgacctatttcgtg
gccgaaaacgcaggcgctatgcaagaggacggtgacacattcgctgacacacttcgaaaa
attcgccgagacgaccttttaccaagcgaaatactcgacgtgctgcatcacttgcgaatt
gaaggcaatgcagctgtacacgggcattcgggtgagcgacgtcttgcctttgaagccatc
aagctgtgtcaccgtctcggtgtttggctgcgagcgtccgtcacgaacaaacctgggttg
acgataccctttataccgccaagtctttcggcagacgacacagaggacctacgccaacaa
gttgaggacctgagacagcaactacataaacagtctctggcagcctctgagcaagccgaa
tttgcccaaaacgccaagtctgcagctcttgacgcagagcagcgcgccgtcctggccgaa
gaagaaagagctatttatgcagagcttgctcttgaggcggagaatattgggcgtgaaaaa
cgaccttcagggtccgcgcaaaccttcatcaaggcagcctttgcttcggcgaaggatatg
gattttgatgaagctgacaccagacttctcgtcgacgaacagcttcgccaggcaggctgg
gaggcagacagcggtgagctgaggtatgcagcgggcaccagacctgagcggaataggaac
attgctattgctgaatggcctacagcgtctggcccagccgattacgcgctatttgttggt
ctcacactggttgggcttatcgaggctaagagaaagcggaagaacgtaatgtcagcgctt
gacgttcaagccacacgatattcccatgacatccaaccagccgaaagtttcaaattcgcc
ggcggcccttggggcgagcacaaagctccattcattttcgcatccaatgggcgaagttac
tatccggctttggaaacccaaagcgggatatggtttcgagatacccgcgtcgcaaaaaat
gcggcccgtgcactcgaaggatggtttaccccagaaggactttcagagcgattggaggtt
gaccgcgaggcagctgaggccaaactcgcggaccagcctttcaatttcgggtttgaattg
cgcccctatcagatcgcagcaattaaagccgtagaggaagggttggcgaaggaacgacgc
gagatgcttgtcgccatggcgactggtaccggaaaaaccaagcttgccatcgctatgatc
tatcgcttgctggaagcgaagagattcttgcgggtttgtttcatcgtcgatcgaagtgca
ttgggcgaacaagcggaaagcgcattcgagacgacacggatggtcggggcaaaaacattt
gcggagatattcggtttgcggggcctcgacgatcacagcacagaccgtgatgctaaaatc
gatatctgtaccgtccaaagtcttgtaaaacgcgtcttggagaaagagcccaggaacaga
ccaccaatcgatcagtatgatcttatcctgatcgatgaatgccatcggggatacctgctg
gatcgcgaaatgagtgcggctgaaaccactttcagagatcaaaacgattacgtctcaaag
tatcgccgcgtcgtcgaatactttgacgctgtaaagatcggcctaaccgcaacccccgcc
cttcacactgcagaaatctttggtgaacctatctatcgttacagttaccgcgaagccgtc
gtcgacggttggctggtcgatcatgatcccccccacctgataaagacggccctgagcaaa
gccggaattaccttggaggcaggcgatacgatcgatattttggatcccaagacaggcgaa
atcgacaccgcgacattgcccgatcagatggatttccgagtcgagcattttaatcgaaaa
atccggaccccgacgttcaacaaagtcgtttccgaagaaattgcacggcgagttgatatt
acctccccagatgcgggcaaaacgcttgtattcgcagcctctgacgatcacgctgatgaa
atcgttgcttgcctccgccaggcctatcgcgacgaaggcctcgatatctgcgatgacatg
atccagaaagtgactggctccatcgacaagccgaataagatgatcttgaaatacaaaaac
gagcgcgatccgcggatcgctgtcaccgtagatcttctgacaactggcatcgatgtgcct
gccatcaaaaaccttgtcttcctgcgtcgcgtcaattcacggattttgtatgaccaaatg
atcggccgggcgacgcgcaagtgcgacgaaatcggaaaagacgctttccagatctacgat
gcagtcgatttgtaccccaaccttcaagccatgacagaaatgcgcccggtggtggtcaat
cctacagtgactttcgaaacccttttcgacgggtttgaaaacgcagaagactccacccac
caagatgaaatccttgaccagatcaccgtcaaactctctcgcaaagtgaggaagatgaat
gacgacatcaggcaacaatacaccgcgcaggcgggagagacgcccgaagaaaccctgaaa
cggttcaggaccaccgaaacaccggctgtaagcatatggacgaaagaacgccctggtctc
ggggccttctttgatttcaaaggggatcgcggtgcaccaccaatcatcccgatctacacg
ggccaagatgaagtagtcagcgtcagccgaggctacggcgacggcgtcaagcccgccgac
ttcatcgatgcctttcaagaattcatccgggaaaatgccaaccgcattgatgccctgaac
ctcgtgctgaccagaccgcgtgatctgacccgtgaaagcctcaaggatctgcggatggcg
ctggatgcgcggcatttcaccgaaagcgccctgagaaccgcttggcgtgacaaaaccaac
gaagatattgctgcctcgattattggtttgatccgtcaggccgccttgggcgatgcgctg
gtcccctacagcacgcgggtcgacgccgccattcgcaaggttttatcgtcccatgatctt
gatgacgttcagcaacgctggctttctaagatcggagatgagatgaagagccaagtcgtc
atcgaccgcaaagccttcgacgatccgcccttcgcgcaacacggcggctacaagcgcttt
gacaaaatcttcaaaggggagctcgacgcgatccttgaagaaatcagaaacaatacatgg
gagcccgcagcatga

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