Pseudorhodobacter turbinis: EOK75_04585
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Entry
EOK75_04585 CDS
T05954
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03420
Nucleotide excision repair
pseb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EOK75_04585
03430 Mismatch repair
EOK75_04585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseb03400
]
EOK75_04585
Enzymes [BR:
pseb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EOK75_04585
DNA repair and recombination proteins [BR:
pseb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EOK75_04585
MMR (mismatch excision repair)
Other MMR factors
EOK75_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCO55115
UniProt:
A0A4P8EF85
LinkDB
All DBs
Position
complement(973747..976119)
Genome browser
AA seq
790 aa
AA seq
DB search
MNGFDENDAFEAAAAPAPQVPLSRRAMAARPAPYLDDLNPAQRAAVEALDGPVLMLAGAG
TGKTKALTTRIVHLLNTGRANPHEILAVTFTNKAAREMKLRVARLMGQSADGMKWMGTFH
SISVKILRRHAELVGLKSNFTILDTDDQLRLLKQLIAASDIDEKRWPARMLAGVIDSWKN
RAWTPQKVPASEASAYNGRGTELYQQYQDRLRSLNATDFGDLLLHTVTLFQAHPDILAQY
QRWFKYILVDEYQDTNVAQYLWLRLLAQAHKNICCVGDDDQSIYGWRGAEVGNILRFETD
FPGAEVVRLEQNYRSTPHILAAASAVIAGNSGRLGKTLWTDREEGEKLRLIGHWDGEEEA
RWIGDEVESLQRGTRAMDAQSLDNMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYER
MEIRDAMAYFRLAISPEDDLAFERVINTPKRGLGDKARQNIQRRARAEGLTLLAGARALL
AEGGISGKGAGQLRAFTDGMGRWHDATLAPNYNHIELAEAILEESGYTAMWQNDKTPEAP
GRLENLKELVKALDNFENLQGFLEHVSLIMENETDEQGAKVSIMTLHAAKGLEFPVVFLP
GWEDGLFPSQRSMDESGAKGLEEERRLAYVGITRAEVLCTISFTANRRVYGQWQSQLPSR
FIDELPADHVDILTPPGLYGGGYGAAAPAPKLEERVASADVYNSPGWRRMQERSAQRGTG
QPREAKGTVIDLAAVSSFTQGDRVFHQKFGYGTVDAIEGDKLGVAFDKAGSKKVIASFVV
AADQAHDLPF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatttgatgaaaatgacgcctttgaggctgccgccgcacccgccccgcaggtg
cccttgtcgaggcgtgcgatggctgcgcggccggcaccctatctggacgacctcaacccc
gcgcaacgcgccgcggtagaggcgctggacggccccgtcttgatgcttgcgggcgcggga
acaggcaagaccaaggcgctgaccacgcggattgtgcatctgctcaacaccggccgcgcc
aacccgcatgagattttggccgtgacctttaccaataaggccgcgcgcgagatgaagctg
cgcgtggcacggctgatgggccaatcggcggatggcatgaagtggatgggcacgttccat
tcgatctcggtgaaaatcctgcgccgtcatgccgaattggtggggctgaagtcgaatttc
accattctggataccgatgaccagcttcggcttttgaaacaacttatcgccgctagtgat
attgacgaaaaacgctggcccgcgcggatgttggcaggtgtaatcgatagctggaaaaac
cgcgcctggacgccgcaaaaggtgcccgcatccgaagcatctgcctataatggtcgcggc
accgagctttaccagcagtaccaagaccggttgcgcagcctcaacgccaccgatttcggt
gatttgctgctgcataccgttacactgtttcaggcccatcccgatattttggcgcagtac
cagcgctggttcaaatacatcctcgtggacgaataccaagataccaacgtcgcccaatac
ctctggctgcggctgttggcgcaagcgcataaaaatatctgctgtgtgggcgatgatgac
cagtcgatctatggctggcgtggggccgaggttggcaatatccttcggtttgaaaccgat
ttccccggtgccgaagtggtgcggctggaacaaaactatcgctctaccccgcatattctt
gcggccgcctcggcggtgattgcgggcaattcggggcgcttgggcaagacgctttggacc
gaccgcgaagagggcgagaagctgcgcctgatcggccattgggacggtgaggaagaagcc
cgctggatcggggatgaggtcgaaagcctgcaacgcggcacccgcgcgatggatgcgcag
agcctcgataatatggctatactggtccgcgcctcgcatcagatgcgcgcgtttgaggat
cgtttcctgaccatcggcctgccgtaccgcgtgatcggtgggccgcgattctatgagcgg
atggagattcgcgatgcgatggcctatttccggcttgcgatctcacccgaggatgatctg
gcctttgagcgggtcattaacaccccaaaacgcgggctgggcgataaggcgcgccaaaat
attcaacgccgcgcgcgcgccgaggggctgacacttttggccggtgcgcgggctttactg
gccgagggcgggatttcgggtaaaggggcagggcagctgcgcgcctttactgatgggatg
gggcgctggcatgatgccacgcttgccccgaattataatcatattgagctggccgaggcg
attctggaggaatccggttacaccgccatgtggcaaaacgacaaaacgcccgaggcgccg
ggccggttggagaaccttaaggaactggtcaaggcactggataactttgagaacctgcaa
gggttcttggaacatgtcagccttatcatggaaaacgagaccgacgagcagggcgccaag
gtcagcatcatgacgctccacgcagccaaaggcttggagtttccggtggtgttcttgccg
gggtgggaggatggcctgttcccttcacagcgcagcatggacgaaagcggtgccaaaggt
ttggaagaagagcgccgtctggcatatgtcggcatcacgcgggccgaggtgctttgcacc
atctcctttaccgccaaccgcagggtttatggccaatggcaaagccagcttcccagccgg
ttcattgacgagcttccggcggatcatgtcgatatcctgacgccgccgggtctttatggc
ggcggttacggtgctgcggcccccgcgccaaagctcgaggaacgcgtagccagcgccgat
gtctataactctccggggtggcggcggatgcaagaacgttccgcacagcggggtaccggc
caaccccgagaggcgaaagggaccgtgatcgatctggcggcggtatcttcctttacccaa
ggcgatcgcgtgttccaccagaaattcggctatggcaccgtcgatgcgatcgagggcgat
aagctgggcgtggcctttgacaaggccggatctaaaaaggtgatcgcaagctttgttgtg
gctgccgatcaggcacatgacctgccgttttaa
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