Pseudorhodobacter turbinis: EOK75_05115
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Entry
EOK75_05115 CDS
T05954
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03030
DNA replication
pseb03430
Mismatch repair
pseb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EOK75_05115
03430 Mismatch repair
EOK75_05115
03440 Homologous recombination
EOK75_05115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pseb03032
]
EOK75_05115
03400 DNA repair and recombination proteins [BR:
pseb03400
]
EOK75_05115
Enzymes [BR:
pseb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EOK75_05115
DNA replication proteins [BR:
pseb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EOK75_05115
DNA repair and recombination proteins [BR:
pseb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EOK75_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_4
PAS
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QCO55207
UniProt:
A0A4P8EEM7
LinkDB
All DBs
Position
complement(1089976..1092069)
Genome browser
AA seq
697 aa
AA seq
DB search
MTGKAKAFALDHLGLRLRVFLFFAALGLGAVVLLGLGLGLGYRRLGSADSLNAFVQAGVI
GSFGVLGLTAGVWYLFDVNVSKPIDLLAGALRARAHASVDSALDQGAARYLGDLAPAAQA
TALTLSETRNALAEAVARETTRLSAEKDRLAALLSDVPVGVILCSGDHQLVFYNGTAVDL
IGADQGPGLDRNLFDYLREGPIRHAHRRLIEAEDADAASDLLCATRHGAEILAARMRLLP
DDSAAPGYVLTLRDVTADLAAHAKREALLADVLDRIRRPAANLRALLSVLPEGTPPPAAM
DVALRAEAESLTATVTDLAAQQEEGRAEAIPRSPLRVADIADSLRAKLEAQGLTLKACDV
PLLLRGDGFEVVGLLARLATGVAELHEVREFALTVEEDSGNALLRLCWDGAPLLLAPLEG
WLDSVLDADVPGVTGRHVLMGHATEIWPETDAEGRQAICLPLRIARRSGPRPKPIARAVV
YDFDLLGKARNEAVADTALSDLTYVVFDTETTGLLPAQGDEIVQIAAVRIVNGKRVASEV
FDTLVNPGRSIPAASTVVHGITEAMVQDAPDIGTVGRAFHRFAQGAVLIAHNAPFDMEFL
RRNEASIGATFDNPILDTVLLSAVVFGQHEDHSLDALTHRLSITIPEEARHTAIGDTVAT
ADAFLKLLPMLKGRELNSFGDVLAEMRRHGRLLKDLN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtaaggccaaagctttcgcgctggaccatctcgggctgcggctgcgggtattt
ttgttctttgccgccctcgggcttggcgctgtggtgctgttgggcttggggcttgggctt
ggctaccggcggctgggatcggccgatagtttgaatgcctttgtgcaggcgggggtaatc
ggcagctttggcgtgctggggctgacggcgggtgtgtggtatctgtttgatgtgaacgtc
tctaaacccatcgaccttttggcgggggccttgcgcgcccgcgcccatgccagcgtggac
agcgcgttggaccaaggtgccgcgcgctatttgggcgatctggcccccgcggcccaagcc
accgcccttaccctgtcggaaacgcgcaatgcgctggccgaggctgttgcccgcgaaacc
acccgtctttctgcggaaaaggaccggctggcggcgctattgtcggatgtgccggtgggg
gtgatcctgtgttcaggcgatcatcagctggtgttttacaacggtacggcggtggatttg
atcggcgcggaccaagggccggggctggaccgcaatctgtttgattatttgcgcgaaggc
ccgatccgccatgcccaccgccgcctgatcgaggccgaggatgccgatgccgcctcggac
ctgctctgtgccactcgccacggggcagagatccttgccgcgcggatgcggttgttgccg
gatgacagtgccgcgccgggctatgtgctgaccctgcgcgatgtcaccgccgatctggcc
gcccatgccaaacgtgaggcactgctggccgatgttctggaccgtatccgccgccccgcc
gccaatctgcgcgctttgctgtcggtgctgcccgaaggcacgccgccgcctgccgcgatg
gatgtggccctgcgtgccgaggccgagagcctgaccgcaaccgtcaccgatctggccgcc
caacaagaggaaggccgcgccgaggcgatcccgcgctcccccctacgtgtggccgatatc
gccgacagcctgcgcgccaagctggaggcgcagggcctgaccctgaaggcctgcgatgtg
cccttgctgctgcgcggtgacgggtttgaggtggtcgggcttttggcgcgattggcgacg
ggcgtggccgaactgcatgaggtcagggaattcgcgttgacggtggaagaagacagtggc
aacgccctgctgcgcctgtgctgggacggtgcgcccttgctgttggcccctctggagggc
tggctggattcggtgctggatgccgatgtgccgggggtgacagggcgtcatgttctgatg
ggacacgccacagagatctggcccgaaaccgatgccgaaggtcgccaagccatctgcttg
cccctgcgcattgcgcggcgcagcggcccgcgccccaagccgattgcccgcgccgtggtc
tatgatttcgacctcttgggcaaggcccgcaacgaggcggttgccgataccgcgctgtcg
gatttgacctatgtggtgttcgataccgaaaccacggggctgttgcccgcgcaaggcgat
gagatcgtgcagatcgcggcggtgcgtatcgtcaacggcaaacgtgtggcgtctgaggtg
tttgacactttggtcaatccggggcgttctattcctgcggcttcaacggtggtgcatggt
atcaccgaggcgatggtacaggacgcccccgatataggcacagtcgggcgggcgttccac
aggtttgcacaaggggcggtgttgatcgcccataacgcgccctttgatatggaatttctg
cgccgcaatgaggccagtattggcgcgactttcgataacccgatcctcgatacggttctg
ctctcggcggtggtattcggccagcatgaggatcacagcctcgatgcgctgacgcaccgt
ctctcgatcaccatccccgaagaggcgcgccacaccgccattggcgatacggtcgcgacg
gcagatgcgtttctgaagctgctgccgatgctcaaggggcgggagctgaacagctttggc
gatgttctggctgaaatgcgccgccatggtcggctgctcaaggatttgaactga
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