Pseudorhodobacter turbinis: EOK75_05415
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Entry
EOK75_05415 CDS
T05954
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EOK75_05415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseb03021
]
EOK75_05415
03400 DNA repair and recombination proteins [BR:
pseb03400
]
EOK75_05415
Enzymes [BR:
pseb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EOK75_05415
Transcription machinery [BR:
pseb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EOK75_05415
DNA repair and recombination proteins [BR:
pseb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EOK75_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QCO55259
UniProt:
A0A4P8EEU2
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All DBs
Position
complement(1147454..1148470)
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AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLVVNPGTDASRIATVIAEPLERGFGLTLGNALRRVLMSSLQGGAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISE
TAGIDVLNKEHVICHLDDGADLFMELTVNTGKGYVSADKNRPEDAPIGLIPIDAIYSPVK
KVSYEVQPTREGQVLDYDKLTMKIETDGSLTPDDAVAYAARILQDQLSIFVNFDEPESAT
RSDVDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKRFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaaaaattgggccgaattgatcaaaccgacgcaactggtggtaaaccccggt
acagatgcgtcgcgcattgcgaccgtcatcgctgaaccgctggaacgcggctttggtctg
acgctgggcaatgctttgcgtcgtgtgttgatgtcatctctgcagggtggcgctatcacc
tccgtgcagattgacaatgtgttgcatgagttttccagcgttgccggtgtgcgtgaagac
gtaaccgatatcgttttgaacctgaagggcgtcagcctgcgtatggaagttgaaggtcct
aagcggctttcgatctcggccaagggtccgggcgttgttaccgctggggatatctcggaa
actgccgggattgacgttctgaacaaagagcatgtgatttgccacctcgatgatggtgct
gatctgttcatggaactgactgtaaacaccggtaagggctatgtttccgccgataaaaac
cgtccggaagacgcgccgatcgggttgattccgatcgatgcgatttactcgccggtgaaa
aaagtcagctacgaagtgcaaccgacccgcgaaggtcaggttttggactatgacaagctg
accatgaaaatcgagacagacgggtccctgacgccggatgacgcagtggcctatgccgcg
cgcatcttgcaagaccaactctcgatcttcgttaacttcgatgagcctgagtcggctacg
cgttcggatgttgacgacgggttggaattcaacccgctgttgctgaagaaagtggacgag
ttggaactttctgtccgctctgcgaactgcctgaagaacgacaatatcgtttatattggc
gatctgatccagaaaaccgaagccgaaatgctgcgtacgcctaactttggccgtaagtcc
ttgaatgaaatcaaggaagtgctgtcaggtatgggcctgcaccttggcatggacgttgag
gattggccgccagagaacatcgaagatttggcgaaacgtttcgaagaccagttctga
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