Pseudorhodobacter turbinis: EOK75_07600
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Entry
EOK75_07600 CDS
T05954
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EOK75_07600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseb03019
]
EOK75_07600 (pnp)
03016 Transfer RNA biogenesis [BR:
pseb03016
]
EOK75_07600 (pnp)
Enzymes [BR:
pseb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EOK75_07600 (pnp)
Messenger RNA biogenesis [BR:
pseb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EOK75_07600 (pnp)
Transfer RNA biogenesis [BR:
pseb03016
]
Prokaryotic type
tRNA degradation factors
EOK75_07600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QCO55615
UniProt:
A0A4P8EGG2
LinkDB
All DBs
Position
1571552..1573684
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AA seq
710 aa
AA seq
DB search
MFNVTKKEIEWGGETLTLETGKVARQADGSVIATMGETSVMANVTFAKAQKPGQDFFPLT
VHYQERYYAAGKVPGGFFKREARPSEKETLTSRLIDRPIRPLFVDGFKNEVLVICTVLSH
DLENEPDVLAMIAASAALTISGAPFMGPIAGCRVGYVGGEYVLNPSCDDMMKLRDNPEQR
LDLVVAGTQDAVMMVESEAYELSEAEMLGAVKFAHDSIQPVIGMIMDFAEECAKEPFDFT
PPNYGDLTARVKAAGETAMRAAFAIRDKQERTTAISAAVAAIKAGLSDEDRADENLGSAI
KALEAGVLRGDIINGSARIDGRDTTTIRPIVSETGILPRTHGSALFTRGETQGLVVTTLG
TGEDEQFIDALTGTSKSNFLLHYNFPPYSVGEVGRFGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLIMDDDGKYA
ILSDILGDEDHLGDMDFKVAGTESGITSLQMDIKIAGITPAIMEKALAQAKDGRLHILGE
MSKALTSAQAFSAYAPKIETMTVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVIKI
ASNNAEAIKKAYDMIWSIVAEPEEGKVYTGKVVKLVDFGAFVNFFGKRDGLVHVSQIANK
RLQHPNEALKEGQEVKVKLLGFDDRGKVRLGMKMVDQETGEEITEAPTEG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgtaacgaaaaaagaaatcgaatggggcggtgaaacgcttaccttggaaaca
ggtaaagtggcccgccaagccgatggttcggttatcgccacgatgggcgaaacctcggtc
atggccaacgtgacttttgcaaaagcgcaaaagccgggccaggacttctttcccctgaca
gtacattatcaggaacgctattacgccgccggcaaagtgccaggcggctttttcaagcgt
gaggcacggccttccgaaaaggaaacgctgacctcccgtttgatcgaccgtccaatccgc
ccgctgtttgtagatggcttcaaaaacgaagttctggtgatctgtaccgttctttcgcat
gacttggaaaacgagcctgacgtgctggcgatgatcgccgcctctgccgcgctgacgatt
tccggcgcaccattcatggggccgattgccggctgccgggtcggctatgtcggtggcgaa
tatgtgctgaacccaagctgcgacgacatgatgaagctgcgcgacaaccccgagcagcgt
ctcgatctggttgtggccggtacgcaagacgccgtgatgatggtggaatccgaagcctat
gagctttccgaagctgaaatgctgggtgccgtgaaattcgcccatgacagcatccagcct
gtgatcggcatgatcatggactttgccgaagaatgcgccaaagagcccttcgactttacc
ccgccaaactatggcgacctgactgcccgcgtcaaagcggctggtgaaaccgccatgcgc
gccgctttcgcaatccgcgacaagcaagaacgcaccactgcgatttcagccgctgttgct
gcgatcaaggctggcctgtcggacgaagaccgcgctgatgagaaccttggctctgcgatc
aaagctttggaagctggcgttttgcgtggcgatatcatcaacggctctgcccggattgat
ggccgtgacacaacgactattcgcccgattgtttcggaaaccggcatcctgccacggacc
cacggttccgccctgtttacccgcggcgaaacccaaggtctggttgtgaccactttgggc
acaggcgaggatgaacagttcatcgacgcgctgaccggcacttcgaaatccaacttcttg
ctgcactataacttccctccctattcggttggtgaagttggtcgtttcggcccccccggc
cgtcgtgaaatcggccacggcaagctggcttggcgtgcgcttcaggcggttctgcctgcg
gcaaccgacttcccatataccattcgtgtggtgtcggagatcactgaatccaacggctcg
tcctcgatggcgtcggtttgcggtggctccttgtccatgatggatgcgggcgtgcccttg
aaggcccctgttgccggtgtggcgatgggtctgatcatggatgacgatggcaaatatgcg
atcctgtcggatatccttggtgacgaagatcaccttggcgacatggatttcaaagtggct
ggtaccgaatccgggattacatccttgcaaatggacatcaaaatcgcaggcatcacgccc
gcgatcatggaaaaggcacttgcacaggccaaagacggccgtctgcatatcttgggcgaa
atgtccaaggcgttgacatctgcacaggcgttctcggcctatgcgccaaagatcgaaacc
atgaccgttccaaccgacaagatccgtgaagttatcggttccggcggtaaggtcatccgt
gagatcgtcgaagtatcgggcgcaaaagtcgatatcaacgacgatggcgtgatcaagatt
gcctccaacaacgccgaggccatcaagaaggcctatgacatgatctggtcgatcgtggca
gagccggaagaaggcaaagtctacaccggtaaggttgtgaaactggttgatttcggggcg
ttcgtgaacttctttggcaagcgtgacggtctggtgcatgtcagccagatcgccaacaag
cgtttgcagcacccgaatgaggcgctgaaagaaggccaggaagtgaaagtgaagcttttg
ggctttgacgatcgcggcaaggttcgcttgggcatgaaaatggttgaccaagaaaccggc
gaagagatcacggaagcccccaccgagggctaa
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