Pseudorhodobacter turbinis: EOK75_09240
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Entry
EOK75_09240 CDS
T05954
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb00300
Lysine biosynthesis
pseb01100
Metabolic pathways
pseb01120
Microbial metabolism in diverse environments
pseb01230
Biosynthesis of amino acids
Module
pseb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EOK75_09240 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pseb01002
]
EOK75_09240 (dapE)
Enzymes [BR:
pseb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
EOK75_09240 (dapE)
Peptidases and inhibitors [BR:
pseb01002
]
Metallo peptidases
Family M20
EOK75_09240 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QCO55909
UniProt:
A0A4P8EGI6
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Position
1925128..1926285
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AA seq
385 aa
AA seq
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MPAFSTPVDPVALTADLIRCNSVTPAEGGALVLLEDLLTKGGFVCTRVDRGGICNLFARW
GRVGANRTFGFNGHTDVVPVGDVAAWTHDPFGAEVVDGWMYGRGATDMKSGVAAFAAAAI
DFVQTTPPDGAVILAITGDEEANAIDGTVALLDWMATNNEAMSVCLVGEPTCPNVMGEMM
KVGRRGSLTAYFTAKGVQGHAAYPHRANNPLNAMVALMERLARHELDKGTDHFDPSTLVI
TTIDTGNPATNVIPAQCRATVNIRFNDAHTGASISDWLRALAAEEQEKTGVGFDVKVTIS
GESFVTPPGALSDMIAKAVQAETGVAPVASTSGGTSDARFVKDHCPVVEFGLVGKTMHQV
DERVEVAQIHQLKAIYSRILTDYFA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctttttcgacccccgttgatcccgtcgctttgactgccgatctgatccgctgc
aattccgtgacgcccgccgaaggtggcgcgctggttttgctggaggaccttttgacaaag
ggggggtttgtttgcacgcgggtggatcgtggcggcatttgcaacctttttgcgcgctgg
ggcagggtcggagcgaaccggacgttcggttttaacggccataccgatgtggtgccggtg
ggcgatgttgcggcttggacacatgacccgttcggtgccgaggtggtggatggttggatg
tatggccgcggggcgaccgatatgaaatcgggggtcgcggcctttgccgccgccgcgatt
gattttgtgcaaaccaccccgcccgatggggccgttattctggctatcaccggtgacgag
gaggctaacgccattgatggtaccgttgccctgctggactggatggccaccaataatgaa
gcgatgagcgtttgtttggtgggcgagccgacctgcccgaatgtgatgggcgagatgatg
aaggtcgggcggcgcggctctctcacggcctatttcaccgcaaagggggtgcagggccat
gccgcctatccgcatcgcgccaataacccgttgaacgcgatggttgccttgatggaaagg
cttgcgcggcatgagctggacaagggcaccgatcatttcgacccctcgaccttggtgatt
accacgattgataccggcaatccggcgacgaatgtgatccctgcgcaatgccgcgccacg
gtgaatatccgctttaacgatgcccatacgggggccagtatttccgattggctgcgcgca
ttggcggccgaggagcaggaaaaaacaggcgtgggttttgatgtaaaggtcacgatttca
ggcgaaagctttgtcaccccgcccggcgctttgtcggatatgatcgccaaggcggtgcag
gcggaaacgggtgtggctccggttgcttccacctctggtgggacgtcggatgcgcgtttc
gtcaaggatcactgtccggtggtggaatttggtctggttggcaaaaccatgcatcaggtt
gatgaacgtgtggaagtggcgcagatccatcagctcaaggcgatctattcgcgcattctg
acggattatttcgcatga
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