Pseudorhodobacter turbinis: EOK75_11070
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Entry
EOK75_11070 CDS
T05954
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pseb
Pseudorhodobacter turbinis
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseb03016
]
EOK75_11070 (rnd)
Enzymes [BR:
pseb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EOK75_11070 (rnd)
Transfer RNA biogenesis [BR:
pseb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EOK75_11070 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QCO56223
UniProt:
A0A4P8EHJ8
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All DBs
Position
2312168..2313325
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AA seq
385 aa
AA seq
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MRTITTTQELAAFCDAAKNESYVTIDTEFLRERTYWSKLCLIQMALPGKDGDAVLVDPID
GAEMSLEPLYDLFRHEATVKVFHAARQDLEIFFVEGNCFPKPLFDTQVAAMVCGFGEQVG
YETLVRKIAHEPLDKTSRFTDWSRRPLSEAQKTYALADVTHLRVIYEALAEQIAESGRQK
WVEEELGVLTDPETYTIRPHEAWQRIKTRTSSARFLAIVKELAQFREAYAQGHNVPRSRV
VKDDALLELASTKPTTVEDLGRSRLLLREARRGEIAEGLLAAVKAGVEAKPDTLPKIDNG
KDQMQVNPALADLLRVLLKAKSEELGVAAKLIASASDLDQIAGGQRKVAALAGWRNEAFG
EDALRLCRGEIALSAKGNNIKVVRL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgataacaacaacgcaagagctggccgcgttttgtgatgccgccaaaaatgaa
agctatgtgacgatcgacacagagttcctgcgcgaacgcacctattggtccaaactgtgc
ctgatccagatggcgcttccgggcaaagatggcgatgccgtgctggtggatccgatcgac
ggcgccgagatgtcgctggaaccgctttatgacctgtttcgccatgaggcgaccgtcaaa
gtgttccacgccgcccgtcaggatcttgagattttctttgttgagggcaattgtttcccc
aagccactgtttgatacgcaggtcgccgcgatggtctgcggctttggtgagcaggtcggc
tatgaaaccttggtgcgcaaaatcgcgcatgagccgttggataaaaccagccgcttcacc
gattggtcccgccgcccgctgagcgaggcacagaaaacctatgcgctggccgatgtcacc
catctgcgcgtgatctatgaggccttggccgagcagatcgccgaaagcggccgccagaaa
tgggtggaagaagaactgggcgttctgaccgatcccgaaacctataccatccgcccgcat
gaggcatggcagcgcatcaagacgcgcaccagctcggcgcggtttttggcgattgtaaag
gaattggcccaattccgcgaggcttatgcgcaggggcacaacgttccgcgcagccgtgtg
gtcaaggatgacgcgctgttggagcttgcatcaaccaaacccaccacggtcgaagatctt
ggccgttcgcgtctgctcttgcgtgaggcgcggcgcggagagatcgccgaggggctgctt
gcagcggtcaaagcaggcgtagaggcaaagccggataccttgccaaagatcgataatggc
aaggaccagatgcaggtaaatccggcgctggccgacttgttgcgagtgttgcttaaggcg
aaatccgaagagctgggcgtcgctgcaaaactgatcgcctctgcctcggatctggatcag
attgcgggcgggcagcgcaaggttgcggcccttgccggttggcgaaatgaagcctttggt
gaggatgcgctgcgtctgtgccgcggtgaaatcgcgctttcggccaagggcaataacatc
aaggttgtgcgcctctaa
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