Pseudorhodobacter turbinis: EOK75_12020
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Entry
EOK75_12020 CDS
T05954
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EOK75_12020 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseb03019
]
EOK75_12020 (groL)
03110 Chaperones and folding catalysts [BR:
pseb03110
]
EOK75_12020 (groL)
03029 Mitochondrial biogenesis [BR:
pseb03029
]
EOK75_12020 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pseb04147
]
EOK75_12020 (groL)
Enzymes [BR:
pseb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EOK75_12020 (groL)
Messenger RNA biogenesis [BR:
pseb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EOK75_12020 (groL)
Chaperones and folding catalysts [BR:
pseb03110
]
Heat shock proteins
HSP60 / Chaperonin
EOK75_12020 (groL)
Mitochondrial biogenesis [BR:
pseb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EOK75_12020 (groL)
Exosome [BR:
pseb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EOK75_12020 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EOK75_12020 (groL)
Exosomal proteins of breast cancer cells
EOK75_12020 (groL)
Exosomal proteins of colorectal cancer cells
EOK75_12020 (groL)
Exosomal proteins of bladder cancer cells
EOK75_12020 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QCO56395
UniProt:
A0A4P8EIC7
LinkDB
All DBs
Position
2498686..2500335
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI
ELSDRFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIREGLKSVAAGMNPMDLKRGI
DLATAKVVEAIKAAARPVSDSAEVAQVGTISANGEAEIGRQIADAMQKVGNEGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFVTNPDKMVAELEDVMILLHEKKLSSLQPMVPLLEQV
IQSQKPLLIISEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISDDLGMKLENVTMDMLGKAKKVTITKDATTIVDGGGEKAEIEARVAQIRNQIEETTSDY
DKEKLQERVAKLAGGVAVIRVGGMSEIEVKERKDRVDDALNATRAAVQEGVVVGGGVALV
QAGKVLVGLEGDNADQTAGIAIVRKALEAPLRQIAQNAGVDGSVVAGKVRESTDPKFGYN
AQTDEYGDMFKFGVIDPAKVVRHALQDAASVASLLITTEAMIADKPEPKGAGGGGMPDMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtcaaatttgataccgatgcccgtgatcgcatgttgcgcggcgta
aacatccttgcggatgctgttaaggtcacgctgggcccgaaaggccgtaacgttgtgatc
gaaaaatccttcggcgcaccacgcatcaccaaagacggtgtttcggttgccaaggaaatc
gaactgtctgaccgctttgaaaacatgggcgcgcagatggttaaagaagtcgcttcgcgc
accaacgacgaagcaggcgacggcaccaccactgcgaccgttctggcacaagcgatcatc
cgcgaaggcctgaaatcggttgccgctggcatgaaccccatggacctcaagcgcggtatc
gatcttgcaactgccaaggttgttgaagcgatcaaagctgctgcacgtccggtttcggat
tccgcagaagttgcgcaagtcggcaccatctcggccaacggcgaagcagaaatcggtcgt
cagatcgctgatgcgatgcaaaaagtcggcaatgaaggcgtgatcaccgtcgaggaaaac
aagggtctggaaacagaaaccgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctattttgtcacaaaccctgacaaaatggttgccgagctggaagacgtaatgatc
ctgctgcacgagaaaaaactctcaagcttgcagcctatggttcctttgttggagcaggtt
atccagtcgcaaaagccgttgctgatcatttctgaggatgttgagggtgaagcccttgca
actttggttgtgaacaagctgcgtggcggtctgaaaatcgctgctgtaaaagctccgggt
tttggcgatcgtcgtaaagccatgctgcaagacatcgcgatcctgaccggtggtcaagtg
atctctgatgatctgggcatgaagctggaaaacgttaccatggacatgcttggcaaagcc
aagaaagtgaccatcaccaaagacgcaacgaccatcgttgacggcggcggcgagaaggcc
gagatcgaagcacgcgttgcccagatccgtaaccagatcgaagaaaccacttccgattac
gacaaagaaaaactgcaagagcgtgtggccaaactggctggcggtgttgctgtgatccgc
gttggcggcatgtccgaaatcgaagtgaaagagcgcaaagaccgcgttgacgatgccctg
aacgcgacccgtgcggccgtgcaagaaggtgttgttgttggcggtggtgttgcactcgtt
caggctggcaaagtgctggtcgggctggaaggcgacaatgctgaccagaccgctggcatc
gcgattgtccgcaaggcgcttgaggctcctctgcgtcagatcgcacagaacgctggtgtt
gatggttctgttgtggctggcaaagtccgcgagtccaccgatccgaagttcggctataac
gcgcagaccgacgaatatggcgacatgttcaaattcggcgttatcgatccggccaaagtt
gtgcgtcacgctttgcaagacgcggcatccgttgcatccttgctgatcaccaccgaagcc
atgatcgccgacaagccagagccaaaaggcgctggtggcggcggcatgccggatatgggt
ggcatgggcggtatgggcggcatgatgtaa
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