Pseudorhodobacter turbinis: EOK75_16505
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Entry
EOK75_16505 CDS
T05954
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pseb
Pseudorhodobacter turbinis
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseb03400
]
EOK75_16505
DNA repair and recombination proteins [BR:
pseb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EOK75_16505
Archaeal homologous recombinant proteins
EOK75_16505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF7158
Motif
Other DBs
NCBI-ProteinID:
QCO58025
UniProt:
A0A4P8EMG5
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Position
unnamed1:842308..843528
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AA seq
406 aa
AA seq
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MMRILHTADWHIGQTLNGFDREAEHRAFLDALADVIVTEEVDALLVAGDIFDGINPSGES
QRLLYTAIASFLRRRPGLTIVMIAGNHDPAARLEAPEAVLRELGVHVLGGLHRDGATVDL
DRHLIPLTDASGTPRAHVLAVPYLRLGDLPGYTVGMQGAGESAVVTAVRALHAGMVAAAL
PRAGGLPLLAMGHLTCAGGLESEGAERRILIGGDHAVPPEIYPSELTYVALGHLHRAQNL
DGGRVRYSGSPFPLSASEIGYNHGVTLVDLDAGPPHRHIPMPPTVACLRIPNTGFAPLDQ
VETALLALDLDADTPMGLRPFVHIALTPDRPATTLTAEAEALLDRHPVRLASLRIDRTTA
EQPQAPPASLADTTPEDLFREAFRQTHSLDPDNSHLSAFRDALSEV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atcatgcgcattttgcacaccgccgattggcacattggccaaaccctgaacggctttgac
cgcgaggccgaacaccgtgcatttctggatgctttggccgatgtgatcgtcaccgaagag
gtcgacgccttgctggttgcgggcgatatctttgacggcatcaacccctcgggggagtcg
cagcgcctgctttacaccgcaatcgcaagctttttgcgccgccgtcccggcctgaccatt
gtgatgatcgcgggcaaccacgaccctgccgcccgcctcgaagcccccgaagccgtcctg
cgcgaactgggcgtgcatgtcttgggcggcctgcaccgcgatggcgcaaccgtcgatctg
gaccgccatctgatcccgctaactgatgccagtggcacgccgcgcgcgcatgttctggcc
gtgccttacctgcgtctgggcgatttgcccggctatacggtgggtatgcagggcgcgggg
gaaagtgccgtggtcaccgccgtccgcgcgcttcatgcaggcatggttgcggcggccctg
ccccgcgcgggcggcctgccgctcttggcgatggggcatctgacctgtgcgggcgggctg
gaatccgaaggcgccgagcgccgcatcctgattggcggcgatcatgccgtgccacctgaa
atctacccgagtgagcttacctatgtcgcattgggccatttgcaccgtgcgcaaaacctc
gatggcggacgggtgcgctattccggctctcccttcccgctttcagccagcgagatcggc
tataaccatggcgtgacgcttgtggatctggatgcaggcccgccgcaccgccacatcccg
atgccgcccacagtcgcctgcctgcgcatacccaataccggatttgcgccgctggatcag
gtggaaaccgcgctcctcgcgcttgaccttgacgccgacacgcctatgggcttgcgcccc
ttcgtccacattgcgcttacccccgaccggcccgcgacaaccctgaccgccgaggccgag
gcgctgcttgaccgccaccccgtccgcctcgcctcgctgcgcattgaccgcaccacagcg
gaacagccacaggcaccgcctgcctcgctggccgataccacccccgaggatctgttccgt
gaggcctttcgccagacacacagccttgatcccgacaacagtcacctaagcgccttccgc
gacgcgctgtccgaggtatag
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